Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1882 ATGAGCGTAAGAGCAAGTTTTTGGTGGCTGTTCAGTGATCACCCTGTTTTAAAGACCAAAGTCTTGCTCTACGGTCCTATTCACCATTCAATCTGCACAGGTGTTCCATTTTTGAACATAACACGTTATCATCCAATCTCCACGCTCTCTATAGCTCGTGGGAACTTGgccaaaatgaatttaaatccAAATGAAACTATGTTCCGCTCAATTACAACACTGAATGAAACCACGTCCAGGTACTTGGTATGCATTGATGCGCCACCCCATATTGTTTCAGATGGCTTATGGGGTGGCGGAAAAAATGGAAGGACTCCAATGAAATCTTTTCTCCCTTTATTTGAGTTACAGGTGCTTTTAATATTTGCCATCACCCAAATCTGCCGTCTTCTCCTCAAGCCCTTGGGACTCCCTATATTTATTTCACAGATGATGGCTGGCCTAATTCTACAAGCTTGTTTTGTGCTGGAACCATTGGGCACATACATGAGGATGTTGTTTCCGTATGGAACTCACGACACCATTTCAACAGTATCGTCGATTGGTTTTGTACTCTTCATTTTTATAAACGGTGTACAGATGGAATTTAGCTTGATAACAAGGATGGGAAAGAAGGCATGGACCATTGCCATAATGGGATTGGTAGTACCGTTGTTAAGTGGCTTTTCAACACAAGCCTTATTCCGTGATCAAGTAGGTAAGTTGATTGGAGACTCCAatcattttgttgttgtattggTGTCGCACACTGTAATTTCATTTGCGGTTATTGCTTCCCTGCTTAATGAACTTCAAATCCAAAACTCGGAACTTGGGAAATTGGCATTATCCTCAGCATTGGTGAGTGACGTATTGTGCACAATCGTTATGACCACCGGCAGTGCATTAATGATTACTGAGAAATCTGCGATGAATGTGGTTTTAAGAAAAGTGGGGTGTGTGTTTGCCATGGGGGTCTTTGTTCCATTGGTGTGTCGTCCAACAATGTTTTGGATCATCAAACATACTCCAGAAGGAAGACCTGTGAAGGATGGTTACATTTATATTATCATTGTAATGCTCTTTGCTTTAGGTTGGGTTTCGGTTAAAATAGATCAAGAATTCGTGCTTGGAGCTTTCATTTTGGGATTGTCTGTGCCAGAAGGACCTCCACTAGGATCTGCATTGGTTAAGAAGCTTAATTTCTTTGGTACCACCTTCCTTTTGCCAATCTATGTCACTACCTCTATGTTGAAAGCAGATTTTTCCGTGGATTATTCATCAGTATCAGTTATTACTACCTGTTTCGTCGTCCTTGTCACCCACTTCATGAAAATTATATCATGCATTGTACCCGCCCTCTGTTGCAACATGCCCATACGTGATGCTCTCTCTCTTGCCCTCATTTTAAACTCCAAAGGTGTAGTGGAAATCGGCCTCTACTGCTTCTTATACGACAATAGGATAATCGATGGGCAAACATATGGAGTAATGATTGTGAGCATAATGGTCGTAGCATGCATTGTGCAATGGTCTGTGAAGGTTTTGTATGATCCTTCAAGAAAATACGCTGGCTATCAGAAAAGGaacatcatcaatttaaaagcCTCGTCTGAGCTAAGGATAGTGGCGTGCATTCATAAACCAAATCACATATCATCAATGATAGATGTGCTTGACATGTGTTGTCCAACAACAGAAAATCCAATCATTGTGGATGTATTGCATCTTATAGAGCTAGTTGGACGGGCCTTACCCATTTTCATTCCCCATCGCGGTCTTCAAAGGCAAGAATCAGGCATTCACAAGTCATACTCAGATGATGTCATTCTTGCTTTTGACATTTATGAGCATGATAACCCACATGCGGTATCAGCATACCCGTGCACGGCAATATCTCCACCCAACCTCATGTACGAAGATGTTTGCAACCTTGCGTTTGACAAAGCTGCATCCATCATAGTTCTTCCTTTTCATCAAAGGTGGTCCCCTGATGGGGAAGTTGAATCCGATGACAAGAACATAAGGGCACTAAATTGTAGGGTCTTAGAATTAGCTCCATGCTCGGTTGGAATCCTCGTGACTCGTGCTTCCCACCAAATTAGAGATTCATCCACTCGATTAGCCATGGTCTATTTGGGTGGACACGATGACCAAGAGGCCTTGTGCTTAGCCAAGAGAGCAAATAGGAATCCGGGGATCAACCTGGTTGTTTACCACCTTGTTTTTAGGGCAGACTTGGAGGACGTAGTGGATGATGACGAGCTACAAGATGTGAAGTACGCGCATAATGTAAAGTATCAGCAAATCATAGCAATGGAAGGATCCGAGACAGCTGCTTTCCTTCGTGAAATAGTAAAAGAGCATGACTTCTTTATAGTTGGGAGACGCCATGGGATCAACTCACCTCAAACCGATGGACTTACAAACTGGAGTGAATTCCCAGAATTAGGTGTCGTCGGTGATTTTCTTGCTTCACCAGATTTGGAGAGTCGTGCATCAATTTTAGTGGTGCAGCAACAACTCTCGCCCAAGACACATGCTGGCTGGTTAATTTAG 2538 0.4184 MSVRASFWWLFSDHPVLKTKVLLYGPIHHSICTGVPFLNITRYHPISTLSIARGNLAKMNLNPNETMFRSITTLNETTSRYLVCIDAPPHIVSDGLWGGGKNGRTPMKSFLPLFELQVLLIFAITQICRLLLKPLGLPIFISQMMAGLILQACFVLEPLGTYMRMLFPYGTHDTISTVSSIGFVLFIFINGVQMEFSLITRMGKKAWTIAIMGLVVPLLSGFSTQALFRDQVGKLIGDSNHFVVVLVSHTVISFAVIASLLNELQIQNSELGKLALSSALVSDVLCTIVMTTGSALMITEKSAMNVVLRKVGCVFAMGVFVPLVCRPTMFWIIKHTPEGRPVKDGYIYIIIVMLFALGWVSVKIDQEFVLGAFILGLSVPEGPPLGSALVKKLNFFGTTFLLPIYVTTSMLKADFSVDYSSVSVITTCFVVLVTHFMKIISCIVPALCCNMPIRDALSLALILNSKGVVEIGLYCFLYDNRIIDGQTYGVMIVSIMVVACIVQWSVKVLYDPSRKYAGYQKRNIINLKASSELRIVACIHKPNHISSMIDVLDMCCPTTENPIIVDVLHLIELVGRALPIFIPHRGLQRQESGIHKSYSDDVILAFDIYEHDNPHAVSAYPCTAISPPNLMYEDVCNLAFDKAASIIVLPFHQRWSPDGEVESDDKNIRALNCRVLELAPCSVGILVTRASHQIRDSSTRLAMVYLGGHDDQEALCLAKRANRNPGINLVVYHLVFRADLEDVVDDDELQDVKYAHNVKYQQIIAMEGSETAAFLREIVKEHDFFIVGRRHGINSPQTDGLTNWSEFPELGVVGDFLASPDLESRASILVVQQQLSPKTHAGWLI 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1882 845 Pfam Sodium/hydrogen exchanger family 119 501 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu9g1882 845 Gene3D - 114 517 IPR038770 -
Ssu9g1882 845 PANTHER CATION/H + ANTIPORTER 73 840 - -
Ssu9g1882 845 PANTHER CATION/H+ EXCHANGER 3 73 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1882 Ssu-Chr9 56360696 56368245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1882 59 834 Antiporter Super Family AT5G22900 36.221 1.25e-153 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1882 - - gmx:100785062 1215.29