Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1878 ATGTGTTTAGTGATCGTCAATATGAGAATGTTGCCTGTTTGCTCAGCCACCGCGAGTTATTCCTCGTCTTCCCAGATTCCCTTGTTTGGGGGATTGCTCCCAATTCGAAAGGATCTTGAGAGCAGATGTGGTGCTGAAGAAGGTGTGCATCTGGCTTCACAATATGGAACTCATTCACTGAGAAAATCATTTACAGTGCAGGCTACAAAGACAGTCTTGGGTAGTTTTTCCTCTCCAAGTGAACCGGGATACCTTACAAGCACATGGGGTTATTCCCCACTGACAACGGATGGGCACCATCCACTGAGTAATGGGGATGTCAGACACATGGAAAGTTATCATTTATCTACTGTGCCAGACGAATTTGTGGACTTTGCAGAACAGTCAACTGAAGTATCTTACACATTAGTGGCACCAACACAACCAGAAGCACTATCAAGTACTGATATACTGCCAGAGAAGTTTGCACCAAGCCCTAGTTCAGTTAATGTGGACAATGAATCGTTAGCCAGTACAAAAGCAAGTGTTGGAGACTTTTTTGACGGAATCAATGAATCATTCAATGCCTCAATCAACAAGGGAGAAAATGCTTTACAAGGCTCACTGGATACAGTCACTTCTTTTATAGATTCTATTGTTAAAACTGCTACTAAATCTGTAGATAATGCTTTTAGTAAGGCATTTTCTGCTGTTGATCAAACAGGGGAATTAGCAAATAAGAAATTTACCAGCTTTTCAAGTGAGCTGAGTGGAGTCACAAATAAAGCACCTGCTGTGGCTACTGATGTGCTGCGCCGCACAATTGTAGTAGTAGAGAGTTCTCTTACAAGTGGGGCTTCCTATGTTGTCTACCTATACGGGTCTGCCAAGGAGCTCCTTCCTGCAGGGATTAGGGATACAGTCAATGTATATGAAGATAAAGCAACAGAAATCTTGAGGCCTGTTGGGTCTGCAACTCAAAGGATATACATGGCTGTCTATTCACTGGAGAAGAGTCTTGGCTTGGATCCAAATGATCCAATTATtccatttattgtttttgtaggCTCTTCAGCCACATTATGGGCCTTTTATTGGTTGTGGACATACGGAGGTTACTCAGGAGATTTATCCCCTAAATCAGCTTTGGAGCTTTTGGCTGAGGACTCAAATGCTGCACTTATTGATGTCCGCACTGAGGAAATGCGAGAAAAAGATGGCATTCCTGATCTTCGACGTGCTGCTCGGTTTCGTTATGCAAGTATTATTCCACTTGAGGTTGGTGGCTCCATACGCAAGTTGTTGAAGAGTGGTAGAGACCTTGATGACTCCTTGATTGCTGCTATTATTCGAAATTTGAAGATTGTTAAGGACAGTTCCAGGGTTATAGTGTTGGATGCTGATGGTACTCGTTCTAAAGGCATTGCAAGATCCTTGAGGAAAATTGGGGTCAAGAATCCATACTTGGTTCAAGGCGGCTTTCAGTCTTGGATGAAAGAAGGTCTCCGCATTAAGGAACTCAAACCTGAGACAGCACTTTCCATACTCAATGAGGAAGCTGAAGCAATTCTGGAGGATGTTAGTCCTTCTCCTTTGCAACTTTTAGGTTATGGTACGGTACTTATTGCAGGGCTGTATGCATTATTAGAGTGGGAGAAGACATTACAGTTAATTGGAGCATTTGGCATCGGTTTGACCATCTATTTGCGGGTTTCTTCATATGAAAACTCAGACGATCTAAAACAAGATGTGAGGTTGTTGCTTGCTCCTGTTAGACTTGGAGCTCAAGCATTTTCATGGGCTGCTGGAAAATTAGAATCAAATGGCATAGGATTACCTACATCACCTTCATCATTAGATGTTCAGAACCGGGTGTTGCAGGCTGCCGCCAAACATGAATCCCAACCATCTGATAGTGAAGATAACCAAGATCCAGTTCCTGAACCGACAGTTCCTCTCAATCAGAATGTATGA 1953 0.4255 MCLVIVNMRMLPVCSATASYSSSSQIPLFGGLLPIRKDLESRCGAEEGVHLASQYGTHSLRKSFTVQATKTVLGSFSSPSEPGYLTSTWGYSPLTTDGHHPLSNGDVRHMESYHLSTVPDEFVDFAEQSTEVSYTLVAPTQPEALSSTDILPEKFAPSPSSVNVDNESLASTKASVGDFFDGINESFNASINKGENALQGSLDTVTSFIDSIVKTATKSVDNAFSKAFSAVDQTGELANKKFTSFSSELSGVTNKAPAVATDVLRRTIVVVESSLTSGASYVVYLYGSAKELLPAGIRDTVNVYEDKATEILRPVGSATQRIYMAVYSLEKSLGLDPNDPIIPFIVFVGSSATLWAFYWLWTYGGYSGDLSPKSALELLAEDSNAALIDVRTEEMREKDGIPDLRRAARFRYASIIPLEVGGSIRKLLKSGRDLDDSLIAAIIRNLKIVKDSSRVIVLDADGTRSKGIARSLRKIGVKNPYLVQGGFQSWMKEGLRIKELKPETALSILNEEAEAILEDVSPSPLQLLGYGTVLIAGLYALLEWEKTLQLIGAFGIGLTIYLRVSSYENSDDLKQDVRLLLAPVRLGAQAFSWAAGKLESNGIGLPTSPSSLDVQNRVLQAAAKHESQPSDSEDNQDPVPEPTVPLNQNV 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1878 650 ProSiteProfiles Rhodanese domain profile. 381 499 IPR001763 -
Ssu9g1878 650 Gene3D - 366 519 IPR036873 -
Ssu9g1878 650 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 354 497 IPR036873 -
Ssu9g1878 650 MobiDBLite consensus disorder prediction 633 650 - -
Ssu9g1878 650 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 10 649 - -
Ssu9g1878 650 MobiDBLite consensus disorder prediction 620 650 - -
Ssu9g1878 650 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 10 649 IPR044690 GO:0009704|GO:0071277|GO:0090333
Ssu9g1878 650 Pfam Rhodanese-like domain 372 492 IPR001763 -
Ssu9g1878 650 CDD RHOD 376 490 - -
Ssu9g1878 650 SMART rhod_4 371 496 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1878 343 460 Sulfurtransferasese or Rhodanese AT5G23060 29.365 5.13e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1878 - - gmx:100786123 1130.93