Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu9g1857 | ATGTTATCTTGTTTCTTGGCAGCTACTGGAAGAGTGACGACCAAAGTAGATGTGTACGCATTTGGAGTAGTTTTGATGGAACTGATTACTGGTAGAAGGGCATTGGACGATACTGTGCCTGATGAAAGGTCTCACTTGGTTTCCTGGTTCCGCAGGGTACTAATTAACAAAGAGAACATCCCAAAGGCAATTGATCAAACTCTCAATCCCGATGAGGAAACTATGGAGAGCATATATAAAGTGTCTGAGCTAGCAGGTCATTGCACTGCTCGTGAACCATACCAAAGGCCAGATATGGGGCATGCAGTGAATGTCTTGGTTCCTCTGGTAGAGCAATGGAAGCCTACCAGCCATGAAGAAGAAGGTTATGGCATTGACCTTCACATGAGCCTTCCTCAAGCTCTGCGAAGATGGCAAGCCAATGAAGGCACTTCCACAATGTTTGACATGTCCATGTCACAAACTCAATCAAGCATTCCCGCAAAACCTTCAGGATTTGCAGACTCCTTTGATTCAATGGATTGCCGGTGA | 531 | 0.4539 | MLSCFLAATGRVTTKVDVYAFGVVLMELITGRRALDDTVPDERSHLVSWFRRVLINKENIPKAIDQTLNPDEETMESIYKVSELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTSHEEEGYGIDLHMSLPQALRRWQANEGTSTMFDMSMSQTQSSIPAKPSGFADSFDSMDCR | 176 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu9g1857 | 176 | PANTHER | OSJNBA0070M12.3 PROTEIN | 6 | 176 | - | - | |
Ssu9g1857 | 176 | Pfam | Protein tyrosine and serine/threonine kinase | 9 | 104 | IPR001245 | GO:0004672|GO:0006468 | |
Ssu9g1857 | 176 | MobiDBLite | consensus disorder prediction | 153 | 176 | - | - | |
Ssu9g1857 | 176 | Gene3D | Transferase(Phosphotransferase) domain 1 | 4 | 132 | - | - | |
Ssu9g1857 | 176 | ProSiteProfiles | Protein kinase domain profile. | 1 | 110 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu9g1857 | 176 | PANTHER | RECEPTOR PROTEIN KINASE TMK1-RELATED | 6 | 176 | - | - | |
Ssu9g1857 | 176 | SUPERFAMILY | Protein kinase-like (PK-like) | 9 | 119 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu9g1857 | Ssu-Chr9 | 55940713 | 55941243 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu9g1857 | 7 | 106 | Receptor kinase-like Gene Family | AT5G56890 | 44.000 | 1.25e-19 | 83.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Ssu9g1857 | PK_Tyr_Ser-Thr | 1.9e-05 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu9g1857 | - | - | gmx:100781851 | 335.109 |