Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1857 ATGTTATCTTGTTTCTTGGCAGCTACTGGAAGAGTGACGACCAAAGTAGATGTGTACGCATTTGGAGTAGTTTTGATGGAACTGATTACTGGTAGAAGGGCATTGGACGATACTGTGCCTGATGAAAGGTCTCACTTGGTTTCCTGGTTCCGCAGGGTACTAATTAACAAAGAGAACATCCCAAAGGCAATTGATCAAACTCTCAATCCCGATGAGGAAACTATGGAGAGCATATATAAAGTGTCTGAGCTAGCAGGTCATTGCACTGCTCGTGAACCATACCAAAGGCCAGATATGGGGCATGCAGTGAATGTCTTGGTTCCTCTGGTAGAGCAATGGAAGCCTACCAGCCATGAAGAAGAAGGTTATGGCATTGACCTTCACATGAGCCTTCCTCAAGCTCTGCGAAGATGGCAAGCCAATGAAGGCACTTCCACAATGTTTGACATGTCCATGTCACAAACTCAATCAAGCATTCCCGCAAAACCTTCAGGATTTGCAGACTCCTTTGATTCAATGGATTGCCGGTGA 531 0.4539 MLSCFLAATGRVTTKVDVYAFGVVLMELITGRRALDDTVPDERSHLVSWFRRVLINKENIPKAIDQTLNPDEETMESIYKVSELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTSHEEEGYGIDLHMSLPQALRRWQANEGTSTMFDMSMSQTQSSIPAKPSGFADSFDSMDCR 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1857 176 PANTHER OSJNBA0070M12.3 PROTEIN 6 176 - -
Ssu9g1857 176 Pfam Protein tyrosine and serine/threonine kinase 9 104 IPR001245 GO:0004672|GO:0006468
Ssu9g1857 176 MobiDBLite consensus disorder prediction 153 176 - -
Ssu9g1857 176 Gene3D Transferase(Phosphotransferase) domain 1 4 132 - -
Ssu9g1857 176 ProSiteProfiles Protein kinase domain profile. 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1857 176 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 6 176 - -
Ssu9g1857 176 SUPERFAMILY Protein kinase-like (PK-like) 9 119 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1857 Ssu-Chr9 55940713 55941243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1857 7 106 Receptor kinase-like Gene Family AT5G56890 44.000 1.25e-19 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Ssu9g1857 PK_Tyr_Ser-Thr 1.9e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1857 - - gmx:100781851 335.109