Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1834 ATGTGGGGCAAGATGTTGAAATCCTCAAGGAAAAGCCTAATAAGCCTTAAAGAGATGTGTATGAAGCAAAAGAGTGAAGTTGATAGTAGTGTGTCAGTGCATGGTGATGACTTGGTTGTTTTGCCTGTGCAGTGGGCAAATTGCAATGGTTGCGCAGAGGAAAGCAAACAATGCAATTGTGATCACATTAGTGCCGCAGAAGGCGCCATTGTCAACGCCCAGCGTGATGCTAACGCCAACAGTTCTTTTACTCATGCTGTCATCAACATGGTGGGGATGCTCATAGGTTTGGGGCAACTGTCAACTCCATATGCTGTAGAAAATGGAGGGTGGGCGTCCGTATTCTTGCTTATGGGACTAGGGGTGATGTGTGCTTATAGTTCTCACATACTAGGAAAATGCCTTAAAAAGAATCCCAAGTTAAGAAGTTTCGTGGATATTGGGAAGCATGCATTTGGCGCAAAAGGAAGATTGGTGGCCGCAACAATCATCTACATGGAAATCTTCATGTCCCTCGTTTCCTACACCATCTCATTACATGATAACTTGATCACAGTCTTTTTGGGGACAAATTTGAAGCTGCACTTGCTTAATTTTTCTACATCCCAGCTCCTAGCCGTGGTGGCAGTCTTGATTGCCCTGCCTACTTTGTGGATCAGAGACCTTTCTTCCATATCTTTCCTTTCAACTGTTGGTATTCTCATGTCTCTACTCATTTTCGTGTGTGTAGCAGCCACTGCACTATTGGGATATGCCCAACCTAATCATACCATGCCGGTCCTCCACCTCCATAATATTCCATCAGTATCTGGCCTTTACGTCTTCGGTTATGGAGGACATATTGTTTTCCCTGATTTATATAAAGCCATGAAAGACCCCTCCAAATTTACTAAGGTTTCTATTGTGAGCTTCGTAGTAGTTACAACACTTTATACGACATTGGGATTCATGGGTGCGAAGATGTTTGGTAAGGATGTGAAGTCTCAGATCACTCTTAGCATGCCGCCAGAGCGCATTGTAACAAAGATTGCTCTGTGGGCAACCGTGGTGACGCCCATGACCAAATATGCGCTTGAATTCGCACCATTTGCAATTCAACTAGAGCATGCGCTTCCAAGTTCCATGAGTGGCAGGACCAAAATGATAATTCGGGGCTGCGTAGGttcatttttacttttggtCATACTAACCCTTGCTCTGTCTGTTCCATATTTTGAGCACGTGCTCAGCCTCACAGGTTCCCTTATTAGTGTggtcatttgtttaattatgcCATGTGCTTTCTACGTGAAGATATGTTGGGGTCAAATACCAATGCCTCTCTTACTCCTGAACCTCTCGCTCATCACGTTCGGCTTTATTCTTGCCGTGATGGGCACCATTTCCTCCTCAACGTTACTactcaaaaattttcaattacatCACTCAACTTCTTGA 1437 0.4301 MWGKMLKSSRKSLISLKEMCMKQKSEVDSSVSVHGDDLVVLPVQWANCNGCAEESKQCNCDHISAAEGAIVNAQRDANANSSFTHAVINMVGMLIGLGQLSTPYAVENGGWASVFLLMGLGVMCAYSSHILGKCLKKNPKLRSFVDIGKHAFGAKGRLVAATIIYMEIFMSLVSYTISLHDNLITVFLGTNLKLHLLNFSTSQLLAVVAVLIALPTLWIRDLSSISFLSTVGILMSLLIFVCVAATALLGYAQPNHTMPVLHLHNIPSVSGLYVFGYGGHIVFPDLYKAMKDPSKFTKVSIVSFVVVTTLYTTLGFMGAKMFGKDVKSQITLSMPPERIVTKIALWATVVTPMTKYALEFAPFAIQLEHALPSSMSGRTKMIIRGCVGSFLLLVILTLALSVPYFEHVLSLTGSLISVVICLIMPCAFYVKICWGQIPMPLLLLNLSLITFGFILAVMGTISSSTLLLKNFQLHHSTS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1834 478 Pfam Transmembrane amino acid transporter protein 80 462 IPR013057 -
Ssu9g1834 478 PANTHER AMINO ACID TRANSPORTER AVT1H 27 473 - -
Ssu9g1834 478 PANTHER OS05G0424000 PROTEIN-RELATED 27 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1834 Ssu-Chr9 55730814 55734828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1834 48 475 Amino Acid or Auxin Permease AAAP Family AT5G16740 59.579 4.91e-168 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1834 - - gmx:100790897 766.533