Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1768 ATGAAAATGGAGGGGCTGGATTTGTTCCTAGTGGCAACAAATACCATAGGCTTCATTTGTGTGTGCAGGGCCCTTGTCAATTTTCTCAAGTGGGTATGGGTGATGTTCTTGAGGCCACCAAAGCAACTCAAAGAATACGGTTCATGGGCTATAATCACTGGCCCCACTGATGGAATTGGCAAGGCCATGGCCTTTGAGTTGGCATCCAAGGGACTTAACCTTCTCTTGGTTGGTCGAAACCCTCTAAAACTAGAGGCAACATCCAAGGAAATAAGAGATAGACACGATGTTGAGGTCAAGTTTGTGGTCGTAGACATGCAAAGAGTTGAGGGAGaggaaataacaaaaagaatagAGGAAGCAATAGATGGTTTAGATATAGGTTTGCTTGTTAATGGTGCAGGCTTGGCTTACCCTTATGCTAGGTTCTTTCACGAGGTTGATTCGGAGCTGATGGATGCTGTTATAAAGGTGAACTTGGAGGGAACAACTTGGATCACAAAGGCAGTGCTTCCCACTATGATCAAGAAGAAAAAGGGAGCAATAGTAAACATTGGCTCCGGTTCCACTGTTGTGCTTCCTTCGTATCCTCTAGTCACCCTCTATGCTGCTACAAAAGCATACCTTGCAATGTTCTCGAGATGCATTAGTTTGGAATACAAGCATCAAGGAATTGACATCCAGTGTCAGGTTCCATTATTTGTGTCAACAAAGATGACCAGAATGAAGACATCTCTTTTTGTACCAACGCCGGATATGTATAGTAGAACATGCACAAGATGGATTGGCTACGAAAAACTGGTTGTGCCCTATTTCCTCCATTCTGTGCAAGGGTTTCTCATACGGGCAATTCCTGATGCATTTGTGGATTCCTATATGCTGCGCTATTTTCTTTACTGGCGCGGAAGAGGACTCTCCAAGGACTCCAAAATTAAAGCATTAGCAGCGTCTAATTCTGAAgcaaacattattaataaagatCGCTCAAATTAG 993 0.423 MKMEGLDLFLVATNTIGFICVCRALVNFLKWVWVMFLRPPKQLKEYGSWAIITGPTDGIGKAMAFELASKGLNLLLVGRNPLKLEATSKEIRDRHDVEVKFVVVDMQRVEGEEITKRIEEAIDGLDIGLLVNGAGLAYPYARFFHEVDSELMDAVIKVNLEGTTWITKAVLPTMIKKKKGAIVNIGSGSTVVLPSYPLVTLYAATKAYLAMFSRCISLEYKHQGIDIQCQVPLFVSTKMTRMKTSLFVPTPDMYSRTCTRWIGYEKLVVPYFLHSVQGFLIRAIPDAFVDSYMLRYFLYWRGRGLSKDSKIKALAASNSEANIINKDRSN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1768 330 CDD 17beta-HSD1_like_SDR_c 47 285 - -
Ssu9g1768 330 Pfam short chain dehydrogenase 49 242 IPR002347 -
Ssu9g1768 330 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 189 217 IPR020904 GO:0016491
Ssu9g1768 330 PIRSF 11-beta-HSD1 1 307 - -
Ssu9g1768 330 Gene3D - 43 267 - -
Ssu9g1768 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 300 IPR036291 -
Ssu9g1768 330 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 6 311 - -
Ssu9g1768 330 PANTHER RH59310P 6 311 - -
Ssu9g1768 330 PRINTS Glucose/ribitol dehydrogenase family signature 202 221 IPR002347 -
Ssu9g1768 330 PRINTS Glucose/ribitol dehydrogenase family signature 223 240 IPR002347 -
Ssu9g1768 330 PRINTS Glucose/ribitol dehydrogenase family signature 174 190 IPR002347 -
Ssu9g1768 330 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Ssu9g1768 330 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Ssu9g1768 330 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 136 IPR002347 -
Ssu9g1768 330 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 202 221 IPR002347 -
Ssu9g1768 330 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 188 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1768 Ssu-Chr9 54990276 54993538 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1768 16 309 Lipid Metabolism Gene Families AT1G67730 48.986 1.91e-109 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1768 K10251 - gmx:100816067 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1768 9 54990276 54993538 Ssu9g1768 9 54990276 54993538 ECH
Ssu5g2583 5 70339865 70343061 Ssu9g1768 9 54990276 54993538 PCT