Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1762 ATGGCTGCTCTGTTACCTTGCGCGCCGAATATAGTCTCTGCTCCGTTCGGGAACCGAAGCAGGAGCCACCTCCCGCACCGACCACACTCCCACGCCTTTTCCGGTTCGACCGGACACTTTCTTCGCGGTTCGCTTTCCGTTGCCCGGTTCGGGTTCCAACCCGGTTTCTTGCCCGAGCCGGATGACGCCGAAGGCGTCCTCAGGGAACTGTTTGGCCGAGCGGAGGGCTTTCTTTACACGATTGCCGATGCCGCCGTTTCTTCTTCCGATAAGGTTGCGGCTTCCACCACCGCCGAACAGAGCAACGATTGGCTTTCCGGAATTACCAATTACATGGAGACGGTTCTCAAGGTACTCAAGGATGGGCTTTCCACTTTGCATGTCCCATATGCTTATGGTTTTGCTATTATACTGCTCACAGTTCTTGTAAAAGCTGCCACTTTTCCATTAACCAAAAAACAGGTAGAATCTGCCTTGGCTATGCGATCTTTGCAACCTCAAGTAAAGGCTATCCAGCAGCAATATGCTGGTGATCAGGAGAGAATTCAGCTTGAAACTGCTCGGTTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCTACACTCGCAACAATACCAGTGTGGATTGGTCTATATCGAGCCCTTTCAAACGTGGCAGATGAGGGACTCCTTACTGAAGGCTTCTTCTGGATACCTTCTCTTGCTGGTCCAACTACAATTGCAGCTCGTCAAAATGGCAGTGGTATCTCTTGGCTTTTCCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGTCAGATACATTGGCTTACCTTGTCTTGCCTGTGCTGCTGGTCGTCTCTCAGTACATCTCTGTCCAAATAATGCAGTCATCACAGGCTAATGATCCCAACATGAAAAGTTCTCAAGCCTTGACCAAGTTCCTTCCATTAATGATTGGTTACTTTGCTCTCTCAGTTCCTTCTGGTCTCAGCCTTTACTGgttaacaaataatatattgagcACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCTAAAAATCCTGTGAGGCAAGTCCCAGATGATATCATGAAGGATGACCTAACACAGGTTCAGAAGTCAATATCTAAACTAAATTCCACAAAAGTGGGAGAAGCCAGACAAAGTGAGAAAACGTCAGAGGGGCCACAACGTGGTGAAAGATTTAAGCAAATAATGGAGCAAGAGGCAAGGAGAAGACAACAAAGAGAAGAAGCAAAAAGGAACGCCATGGAAGCAGCAGCTAGAGAAACTAACGTACACGAGACACTTGAGAAAACAGTTGAAGGGGGAAATCAAACCTTTGGTGatttagttgttgaaaaatCTCGGTCTGTGGCTTCAGATACTGATCCCTCCATATCTGGAGTTGTAAATGGTAATCCATTAAGTAAAGACTTGGAGGGAAATCAGAACTCTACGTCTACATCTGAGACAGAAAATAATGTAGGTGCTGCTCATTTCAACAATGTTGAGATAAACGAGAAAAGTTTAGACAAGGAACCAAGAGAAGTATTAACAACTTCAGCCACCACAAACCAACAATCTCCTGCAGAAGATGCAGATCGTATGGCAAAGGATTGA 1617 0.457 MAALLPCAPNIVSAPFGNRSRSHLPHRPHSHAFSGSTGHFLRGSLSVARFGFQPGFLPEPDDAEGVLRELFGRAEGFLYTIADAAVSSSDKVAASTTAEQSNDWLSGITNYMETVLKVLKDGLSTLHVPYAYGFAIILLTVLVKAATFPLTKKQVESALAMRSLQPQVKAIQQQYAGDQERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTIAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQANDPNMKSSQALTKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDDIMKDDLTQVQKSISKLNSTKVGEARQSEKTSEGPQRGERFKQIMEQEARRRQQREEAKRNAMEAAARETNVHETLEKTVEGGNQTFGDLVVEKSRSVASDTDPSISGVVNGNPLSKDLEGNQNSTSTSETENNVGAAHFNNVEINEKSLDKEPREVLTTSATTNQQSPAEDADRMAKD 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1762 538 MobiDBLite consensus disorder prediction 385 435 - -
Ssu9g1762 538 Pfam 60Kd inner membrane protein 132 346 IPR001708 GO:0016021|GO:0032977
Ssu9g1762 538 PANTHER OXA1 23 467 IPR001708 GO:0016021|GO:0032977
Ssu9g1762 538 Coils Coil 405 425 - -
Ssu9g1762 538 MobiDBLite consensus disorder prediction 373 440 - -
Ssu9g1762 538 PANTHER BNAA09G28180D PROTEIN 23 467 - -
Ssu9g1762 538 MobiDBLite consensus disorder prediction 454 538 - -
Ssu9g1762 538 MobiDBLite consensus disorder prediction 457 499 - -
Ssu9g1762 538 MobiDBLite consensus disorder prediction 515 530 - -
Ssu9g1762 538 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 132 346 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1762 Ssu-Chr9 54960937 54966764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1762 70 418 Chloroplast and Mitochondria Gene Families AT2G28800 56.250 3.53e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1762 K03217 - gmx:100802546 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1762 9 54960937 54966764 Ssu9g1762 9 54960937 54966764 ECH