Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1747 ATGTTAGGGGAAGAGGGGAAGGAAAAAACCACCGGTAGCGGTGTTGCATGGAAAACCTATTCTCGTTCGGTTTCATGGACTGATAGGTCTCCTAATAGCCGTAAGCCACCGACAAATAGCAAACCACGACCACTGTTGCCACCTCTTCAGCCTCTCTCAATCAACAAGCGTAGCGTGGAGGAATGGCCTAGTGCTGGATCTGATGATCTTGGAGTTTGGCCACTTCCTCAGACTCCAAGAGGCTCCATCAGAGCCTATAATTCAAGTCAACCCACCAAGGATTTTCTCTTCAAGAGGGAAAAATTGGCCTTCTTTGACAAGGAGTGTTCCAGGATTGCTGAGCATATATACTTGGGGAGTGACACAGTTGCCAAAAACCATGAACTCCTCAGGCAGAATGGAATCACTCATGTGCTCAACTGTGTTGGGTTTGTTTGTCCTGAGTATTTCAAAGGTGATTTTGTGTACAAGACTCTTTGGTTGCAGGATAGCCCCACGGAGGACATCACAAGTATTCTCTATGATGTGTTTGATTACTTTGAGGATGTTCGAGAGCAAGGTGGGCGTGTCCTTGTCCATTGTTGTCAAGGGGTTTCTCGGTCGACAGCTTTGGTAATTGCTTATCTCATGTGGAGGGAGGGGCAGAGCTTTGAAGATGCTTTTCAGTTTGTGAAGACTGCAAGGGCTGTGACCAACCCAAACATGGGTTTCGCTTGTCAACTTTTGCAGTGTCAGAAACGGGTCCATGCTATGCCTGCAAGTCCTAATTCTATTCTCAGGATGTACCGGATGGCTCCTCACTCCCCCTATGACCCTCTTCATCTGGTCCCCAAAATGGTAAACCAGCCAGGTGTGCAAGCTCTTGATTCTCGTGGGGCCTTCATTATTCATGTTCCTTCTGCTATTTATGTTTGGAATGGGAAACATTGTAGCTCGGTGATGTCATGCAATGCAAGGAGTGCAGCCTTTCAGGTGATCCGTTATGAGAGAGCAAAGGGTCCAATTCTGAGGATCCACGAAGGTGAAGAACCACCTGCGTTTTGGATTGCTCTTTCTGATGAGCAACGGTTATCAGGTGACTCTGACAAAGGAGGGGTCGTGGAGTTGTCCTCTGAAGGCATGGAGAGTGCTGAGCCAGTTGATTCGGGGACTAGTCCAAGAAAAGTTGATGCATATGATTTGGATTTTGAGATTTTCCACAAGGCACTTGCTGGTGGGGTTGTTCCACCTTTTCCCTTGTCTGATCCAGGGTCAGAAACTTGCCTTCCTGCTAGAGAACACGGTTGGGCAAGACTCAGAAGGAAGTTTGCTAGTGGATTGCTCACATCCCCCAAATGGAACTCTGATGCTAATTCAACCCCATGCAATGATCAATCCAGTGTAACCGTGGAAGCTGAAAAACAACATTCTGCAGATGAGCCTTTGTCACCATCATCAATTCATCCCTGTGGTTCACCTGATTCCTTTGAGTACTCTCCAAATAACAGGTTAAGTAGGGAAAAAGGTAGTCCTGAAGCCATGGACTTCTCCGTTCCTGGTGTTGCTTCATCACTGCCACTGTCTCCTCCTGGCACATCGAATCCTTTTCCTTGTTTTATAAGCTGCAGTCCAAAATTCAATTCCAAGTCACCAACACTTTCACCTTCAAGTTCTGATTATGCCAGTTCATTTACTTTTTCACCTTCCTCCACCAACTGGTCCGACTTGTCCTTCGTGTCTTCTCGGCAGCCATCACCATCTGGCCCCGAATCAGCTGAACCCTTTTATTTTCAAGATGCATCTTTCTCAGAAGGTGCCTCTTTACTTCATAAAGAAGTCGTCCCTTCCCCCTCAGAGGCATTTTCGGCTAATCACACATTCGGAGGGGCGAACTCCAATTTGCCATCGAAAGGTTCTTCCCTCTCCATTGCAGAGCGCAGAGGGAGTAATCCACCGCCTCTGATGTTACTATCCTCGGCCAGTGAATCCTCGCACATCCCCAAGAACCTGGAGGACTGCAACTAA 2004 0.4746 MLGEEGKEKTTGSGVAWKTYSRSVSWTDRSPNSRKPPTNSKPRPLLPPLQPLSINKRSVEEWPSAGSDDLGVWPLPQTPRGSIRAYNSSQPTKDFLFKREKLAFFDKECSRIAEHIYLGSDTVAKNHELLRQNGITHVLNCVGFVCPEYFKGDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSTALVIAYLMWREGQSFEDAFQFVKTARAVTNPNMGFACQLLQCQKRVHAMPASPNSILRMYRMAPHSPYDPLHLVPKMVNQPGVQALDSRGAFIIHVPSAIYVWNGKHCSSVMSCNARSAAFQVIRYERAKGPILRIHEGEEPPAFWIALSDEQRLSGDSDKGGVVELSSEGMESAEPVDSGTSPRKVDAYDLDFEIFHKALAGGVVPPFPLSDPGSETCLPAREHGWARLRRKFASGLLTSPKWNSDANSTPCNDQSSVTVEAEKQHSADEPLSPSSIHPCGSPDSFEYSPNNRLSREKGSPEAMDFSVPGVASSLPLSPPGTSNPFPCFISCSPKFNSKSPTLSPSSSDYASSFTFSPSSTNWSDLSFVSSRQPSPSGPESAEPFYFQDASFSEGASLLHKEVVPSPSEAFSANHTFGGANSNLPSKGSSLSIAERRGSNPPPLMLLSSASESSHIPKNLEDCN 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1747 667 CDD DSP 109 243 - -
Ssu9g1747 667 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 104 250 IPR029021 -
Ssu9g1747 667 MobiDBLite consensus disorder prediction 481 499 - -
Ssu9g1747 667 MobiDBLite consensus disorder prediction 613 667 - -
Ssu9g1747 667 Pfam Dual specificity phosphatase, catalytic domain 116 246 IPR000340 GO:0008138|GO:0016311
Ssu9g1747 667 ProSiteProfiles Dual specificity protein phosphatase domain profile. 108 250 IPR020422 GO:0006470|GO:0008138
Ssu9g1747 667 SUPERFAMILY Actin depolymerizing proteins 254 355 - -
Ssu9g1747 667 MobiDBLite consensus disorder prediction 443 465 - -
Ssu9g1747 667 Gene3D Severin 260 358 IPR029006 -
Ssu9g1747 667 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 167 228 IPR000387 GO:0016311|GO:0016791
Ssu9g1747 667 SMART dsp_5 108 247 IPR020422 GO:0006470|GO:0008138
Ssu9g1747 667 Gene3D Protein tyrosine phosphatase superfamily 86 250 IPR029021 -
Ssu9g1747 667 MobiDBLite consensus disorder prediction 613 639 - -
Ssu9g1747 667 MobiDBLite consensus disorder prediction 24 51 - -
Ssu9g1747 667 MobiDBLite consensus disorder prediction 443 510 - -
Ssu9g1747 667 MobiDBLite consensus disorder prediction 647 661 - -
Ssu9g1747 667 ProSitePatterns Tyrosine specific protein phosphatases active site. 192 202 IPR016130 GO:0016311|GO:0016791
Ssu9g1747 667 PANTHER MKPA PROTEIN 18 655 - -
Ssu9g1747 667 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 18 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1747 Ssu-Chr9 54748840 54751676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1747 39 144 Protein tyrosine phosphatase (PTP) family AT3G55270 55.172 1.85e-32 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1747 - - gmx:100775448 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1747 9 54748840 54751676 Ssu9g1747 9 54748840 54751676 ECH