Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1713 ATGATAAGCGTAGCTGTCCATAGGAACCTGTTACGGCTCATTGGTTTTTGTACTACTCCAACTGAACGCCTCTTAGTTTATCCCTTCATGCAGAACTTAAGTGTTGCCTATCGTCTACGAGAACTCAAACCTGGGGAACCCGTTTTAGATTGGCCTACTAGAAAGCGAGTGGCTCTAGGAACAGCCCGTGGCCTAGAATATCTTCACGAGCAATGCAATCCTAGGATTATTCATAGGGATGTGAAGGCAGCTAATATATTACTAGATGGAGATTTTGAAGCAGTTGTTGGTGACTTTGGTTTGGCAAAATTAGTTGATGTTAGAAATACTAATGTGACAACTCAAGTTCGTGGGACAATGGGTCATATAGCTCCAGAGTACTTGTCCACTGGAAAATCTTCAGAAAGGACTGATGTTTTTGGTTATGGGATTACGCTTTTGGAGCTTGCTACAGGTCAACGGGCAATTGACTTTTCACGTTTGGAAGAGGAAGATGACGTGTTATTGCTTGACCATGTTAAGAAACTGCAACGGGAGAAAAGACTAGATGCTATTGTCGACTGCaaccttaataaaaattacaacatAGAAGAGATTGAAATGATTGTACAAATTGCATTACTCTGCACGCAAGCATCACCCGAGGATCGTCCACCAATGTCAGAAGTTGTAAGAATGCTCGAGGGAGAAGGGCTGGCTGAAAGATGGGAGGAATGGCAGCATGTGGAGGTTTCTACGAGGCAAGATTATGAGAGGCTAAAAAGAAGTTTGAACTGGGGAGAAGATTCGGTTTATAACCAAGATCCCATTGAGTTATCGGGTGGAAGATGA 831 0.4224 MISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELKPGEPVLDWPTRKRVALGTARGLEYLHEQCNPRIIHRDVKAANILLDGDFEAVVGDFGLAKLVDVRNTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGITLLELATGQRAIDFSRLEEEDDVLLLDHVKKLQREKRLDAIVDCNLNKNYNIEEIEMIVQIALLCTQASPEDRPPMSEVVRMLEGEGLAERWEEWQHVEVSTRQDYERLKRSLNWGEDSVYNQDPIELSGGR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1713 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
Ssu9g1713 276 SMART serkin_6 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1713 276 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Ssu9g1713 276 PIRSF ILK 1 245 - -
Ssu9g1713 276 ProSiteProfiles Protein kinase domain profile. 1 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1713 276 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 1 276 - -
Ssu9g1713 276 SUPERFAMILY Protein kinase-like (PK-like) 6 228 IPR011009 -
Ssu9g1713 276 Gene3D Transferase(Phosphotransferase) domain 1 31 247 - -
Ssu9g1713 276 Pfam Protein kinase domain 6 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1713 276 PANTHER LRR RECEPTOR-LIKE KINASE 1 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1713 Ssu-Chr9 54292035 54293849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1713 1 276 Receptor kinase-like Gene Family AT5G10290 84.058 1.31e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Ssu9g1713 Pkinase 4.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1713 - - gmx:100786654 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1713 9 54292035 54293849 Ssu5g2272 5 64885141 64891215 PCT