Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1690 ATGTGCAGGAGCTCTAGTGATTCAGAGATGGTTGCTTCAACGAAATCCACATTGAACGGCACGTTAGAAGAGGTTCTGGACATTGAGAACAACATGGCTCAGTGGGTGCTCAATCCTCCAGACCCACCATCCATGCTGCGTCAGGTCGTGGACACCATCAAGGACACCCTCTTACCGCATCCTAATCCAAACGCATTCTCTTCTCTCAGGAATCAACCCTTTTCCAAACGCGCCTTCGCCCTGTTGCAGGACCTGTTCCCCATTCTTGCCTCATTCCAAAACTACAACGCCCAAAAGTTCAAGTGCGATTTCATGGCCGGTCTAACCCTTGCAATCTTCGCCATTCCTCAGTGTATGGGAAATGCGACATTGGCGCAGCTAAGTCCTGAATATGGCCTCTACACAGGAATTGTCCCACCTCTTATTTATGCGTTGCTGGCGAGTTCAAGGGAGATAGTGATCGGACCTGGATCTGTGGATTCACTGCTTCTTTCCTCAATGATTCAGACATTGAAAGTTCCTATTCATGATTCTATTACTTACACTCAGCTTGTTTTCACTGTAACCTTTTTTGCGGGCATCTTTCAAGTTGCTTTCGGGCTCTTTAGGTTTGGTTTTCTGGTGGAATATCTTTCCCAAGCCACGATCGTGGGGTTCTTGGCAGCAGCTGCCGTGGGCATTGGACTACAACAATTGAAAGGATTATTTGGGATCGTTAATTTTACCAACAAAACTGCTTTATTTTCCGTGGTGAAATCTGTTTGGGCATCGTTCAAAAACCAATCAGAGTGGCATccttacaattttattattggaTTCTCATTTCTCTGTTTCATCCTATTTACCAGATTCCTGGGGAAAAGGAACAAGAAACTCATCTGGTTGTCACACGTTGCTCCTCTCTTTTCTGTTATTGTATCCTCTGTTATtgcatacaaaataaatgttcaTGAGCATCAAATGAAGGACTACAGAGTTGAAGTCTTGGGGCCAATTAAAGGAGGTAGCTTGAACCCAAGCTCACTCTACCAGTTAACATTTGATAGCAAAGTTGTGGGTCATTTGATCAGAATAGGGTTGACCATTGCTGTTATTTCACTCACGGGATCTATTGCTGTTGGCCGATCATTTGCATCTCTAAGAGGACGCAGTATTGATCCCAACAGAGAAGTGGTATCCTTAGGCATAATGAACATTGTTGGATCCCTCACTTCTTGCTATGTTGCATCAGGGTCTTTGTCACGTACCGCTGTAAACTATAATGCTGGCTCCGAAACAATGGTGTCGAACATAGTGATGGCACTCACGGTCCTCATGTCACTTAAATTTTTGACGGGGCTTTTATATTTCACTCCGAAAGCAATCCTAGCAGCAATAATTCTTTCAGCTGTACCAGGACTCATTGACCTTAACAAAGCACGTGAAATTTGGAAGGTTGATAAAATGGATTTCCTTGCTTGCGCTGGAGCCTTTTTGGGAGTGTTGTTTGCATCTGCGGAAATAGGCCTCGCAATTGGgATCACGATATCATTCGCGAAGATAATCATAATCTCAATTCAACCTGCTATAGCGGTTGTTGGAAGGCTTCCAGGAACTGATGCATTCGGTGATGTTGAACAATATCCAATGGCGGTCAACATTCCAGGAGTTTTGATAGTCTCTTTAAAATCTGCTTGGCTTTGTTTTGCAAATGCAAATCTTGTGGAGGAAAGGTATCTATTAATTGTCCATAATAACATGATAGGTCTTACGAATATTGACACCGCGGGAATTGCTTCTTTGGTGGAGCTCAATAAAAATCTGACTTCACGTGGAGTAAAGTTAGCCATCGCTAACCCTAGGTGGCATGTAATTCACAAGCTAAGATTAGCTAACTTCGTGAGCAAAATTGAAGGAAGGGTTTTCCTTTCTGTGGGGGAAGCAATAGATGCATGTCTTGGCACTAAAATGGTTCCTGTATAA 1962 0.4276 MCRSSSDSEMVASTKSTLNGTLEEVLDIENNMAQWVLNPPDPPSMLRQVVDTIKDTLLPHPNPNAFSSLRNQPFSKRAFALLQDLFPILASFQNYNAQKFKCDFMAGLTLAIFAIPQCMGNATLAQLSPEYGLYTGIVPPLIYALLASSREIVIGPGSVDSLLLSSMIQTLKVPIHDSITYTQLVFTVTFFAGIFQVAFGLFRFGFLVEYLSQATIVGFLAAAAVGIGLQQLKGLFGIVNFTNKTALFSVVKSVWASFKNQSEWHPYNFIIGFSFLCFILFTRFLGKRNKKLIWLSHVAPLFSVIVSSVIAYKINVHEHQMKDYRVEVLGPIKGGSLNPSSLYQLTFDSKVVGHLIRIGLTIAVISLTGSIAVGRSFASLRGRSIDPNREVVSLGIMNIVGSLTSCYVASGSLSRTAVNYNAGSETMVSNIVMALTVLMSLKFLTGLLYFTPKAILAAIILSAVPGLIDLNKAREIWKVDKMDFLACAGAFLGVLFASAEIGLAIGITISFAKIIIISIQPAIAVVGRLPGTDAFGDVEQYPMAVNIPGVLIVSLKSAWLCFANANLVEERYLLIVHNNMIGLTNIDTAGIASLVELNKNLTSRGVKLAIANPRWHVIHKLRLANFVSKIEGRVFLSVGEAIDACLGTKMVPV 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1690 653 Pfam Sulfate permease family 100 488 IPR011547 GO:0016021
Ssu9g1690 653 Gene3D STAS domain 520 647 IPR036513 -
Ssu9g1690 653 PANTHER EARLY NODULIN-70 20 651 - -
Ssu9g1690 653 ProSitePatterns SLC26A transporters signature. 129 150 IPR018045 GO:0008271|GO:0008272
Ssu9g1690 653 PANTHER SULFATE TRANSPORTER 20 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
Ssu9g1690 653 CDD STAS_SulP_like_sulfate_transporter 541 636 - -
Ssu9g1690 653 Pfam STAS domain 541 641 IPR002645 -
Ssu9g1690 653 TIGRFAM sulP: sulfate permease 87 638 IPR001902 GO:0015301|GO:0016020|GO:0055085
Ssu9g1690 653 ProSiteProfiles STAS domain profile. 579 645 IPR002645 -
Ssu9g1690 653 SUPERFAMILY SpoIIaa-like 547 645 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1690 Ssu-Chr9 53852692 53862202 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1690 29 650 Inorganic Solute Cotransporters AT5G10180 53.583 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1690 K17469 - gmx:100817841 1093.18