Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1689 ATGGCTTCTTCAGCGATGGAGACCTGCATATCAGAGGACGTGCACATGCAGGTAGACATTGAGAAGAACGCGCAGGATGTAAGGTCTCAGTGGGTGCTTAACGCTCCTGAGCCCCCAAGTCCCTGGCGTGTGGTTGCAGATTCTGTCAGGAAAACCATTTCCCACTATCAACTAAAGTTTTCCTCTCTCAAAGATCAACCCTGCACCACACTCCTCCTTTCACTTTTGCAAGTCATTTTTCCTATTCTTGCTTGGGGCAGAAACTACACTGCCACTAAGTTCAGGAAAGATCTTCTTGCAGGCCTCACTATTGCCAGTCTCTGTATTCCCCagAGCATTGGCTATGCGACCTTAGCAAATCTTGATCCTCAATATGGTCTTTATACAAGTGTTGTACCACCGCTTATCTATGCTGTAATGGGAACCTCGAGATATAGCAATTGGTCCTGTGGCCGTGGTTTCTCTGCTGTTATCCTCAATGATCGAGAAAGTAGTAGACCCTGTTGCCGATCCAGTGGGTTATACAAAGCTGATTTTGCTTGCTACTCTCTTTGCTGGCTGGGGTTCCTTGTGGATTTTCTATCCCATGCTGCAATTGTTGGATTTGTGGCAGGAGCAGCCATTGTGATTGGGCTTCAACAGTTGAAGGGGCTGTTAGGAATCACCCATTTTACGACAAAAACCGACATAGTCTCTGTCATGAAAGCTGTCTGGGAAGCAGTTCATAATCCATGGAACCCTCGAAATTTTATCCTCGGATTCTCGTTCTTGATCTTCATCCTAACGACGAGATTTCTGggtaaaaggaagaagaaactgTTCTGGTTGGCGTCAATATCTCCTCTTTTATCTGTTATTCTGTCAACTCTAATTGTGTTTCTGACAAGAGCTGataaaaatggagttaaaatTGTGAAACGTGTCAAAGGGGGATTAAATCCAAGCTCCATCCATCAGTTAGACTTCGACAACCCCTACATTGGAGAAGTGGCCAGAATTGGACTAGTGGTTGCTGTCGTTGCCCTTGCTGAATCTATTGCTGTTGGACGGTCTTTTGCATCCATCAAAGGATACCAACTTGATGGAAACAAGGAGATGATGTCAATAGGTTTCACAAACATCATAGGATCATTCACCTCCTGCTACGTCGCAACTgGTTCGTTCTCCCGTACCGCTGTTAATTATGCAGCTGGCTGTGAAACTTTGGTGTCAAACATTGTGATGGCCATCACGGTCTTGTTATCACTGCAGTTTTTGACAAAGCTCTTGTATTATACTCCAACCGCTATTCTTGCTTCTGTGATCCTCTCTGCTCTCCCAGGACTCATTGACATCACTGAAGCTTACAAAATTTGGAAGATTGATAAGCTAGACTTTCTTGCTTGCACTGGAGCCTTCTTTGGAGTACTGTTTGCTTCTGTGGAAATTGGTCTGCTAGTGGCGGTGTTAATATCTTTTTCAAAGATCATTCTCATCTCAATTCGACCTGGCACAGAAACTCTAGGAAAACTTCCGGGAACTGATTTGTTCTGCGATGTCTATCAGTATCCTATGGCAGTTAAGATTCCCGGGGTTATGATAATACGTGTCAAGTCTGCGTTGCTTTGCTTTGCAAATGCCAATTTCGTTAGAGAAAGGATCATCAAATGGGTCACTGAGGAAGAATCAGAAGATGACAAGGGAAATTCAAGAGACACCATTCAACTCGTAATTCTTGACACCTCCAATTTGGTGAACATTGACACCTCTGGAATTTCTTCTCTAGAGGAACTGCATAAGAGTTTGTCTTCACATGGAAAACAGTTAGCCATTGCCAACCCTAGGTGGCAAGTGATACACAAGCTAAAGGTGTCCAACTTTGTTGGCAAAATTGGTGGCAGAGTCTTTCTGACTGTTGAAGAAGCTGTTGGGTGCAAGAGCGTTGGATAA 1929 0.4339 MASSAMETCISEDVHMQVDIEKNAQDVRSQWVLNAPEPPSPWRVVADSVRKTISHYQLKFSSLKDQPCTTLLLSLLQVIFPILAWGRNYTATKFRKDLLAGLTIASLCIPQSIGYATLANLDPQYGLYTSVVPPLIYAVMGTSRYSNWSCGRGFSAVILNDRESSRPCCRSSGLYKADFACYSLCWLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLLGITHFTTKTDIVSVMKAVWEAVHNPWNPRNFILGFSFLIFILTTRFLGKRKKKLFWLASISPLLSVILSTLIVFLTRADKNGVKIVKRVKGGLNPSSIHQLDFDNPYIGEVARIGLVVAVVALAESIAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMAITVLLSLQFLTKLLYYTPTAILASVILSALPGLIDITEAYKIWKIDKLDFLACTGAFFGVLFASVEIGLLVAVLISFSKIILISIRPGTETLGKLPGTDLFCDVYQYPMAVKIPGVMIIRVKSALLCFANANFVRERIIKWVTEEESEDDKGNSRDTIQLVILDTSNLVNIDTSGISSLEELHKSLSSHGKQLAIANPRWQVIHKLKVSNFVGKIGGRVFLTVEEAVGCKSVG 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1689 642 PANTHER SULFATE TRANSPORTER 18 637 IPR001902 GO:0015301|GO:0016020|GO:0055085
Ssu9g1689 642 ProSiteProfiles STAS domain profile. 535 639 IPR002645 -
Ssu9g1689 642 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 18 637 - -
Ssu9g1689 642 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Ssu9g1689 642 Pfam Sulfate permease family 186 463 IPR011547 GO:0016021
Ssu9g1689 642 Pfam Sulfate permease family 94 146 IPR011547 GO:0016021
Ssu9g1689 642 Pfam STAS domain 516 635 IPR002645 -
Ssu9g1689 642 Gene3D STAS domain 495 640 IPR036513 -
Ssu9g1689 642 CDD STAS_SulP_like_sulfate_transporter 516 630 - -
Ssu9g1689 642 SUPERFAMILY SpoIIaa-like 520 636 IPR036513 -
Ssu9g1689 642 TIGRFAM sulP: sulfate permease 184 632 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1689 Ssu-Chr9 53832552 53841809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1689 25 636 Inorganic Solute Cotransporters AT5G10180 63.074 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1689 K17469 - gmx:100781327 1073.92