Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1661 ATGGCTTCTTACTACTTCCTCTTGTTTGTTCTTGTTGCTGCTACTGCACTTTCTGAAGCAGATGCCAAAAAGAAGTTATTCCCAGATTTCTACTCTAGCAGCTGCCCGGAGCTGTTGCCTATAGTGAAAAAAGGAGTCATAAAAGCCATGAAAAATGAAACTCGCATGGGAGCTTCCTTACTTCGATTGCATTTCCATGACTGCTTTGTAAACGGCTGTGATGCATCAATACTGTTGGATGATACAAGCAGTTTCATAGGAGAGAAAACGGCAGCACCTAATAATAATTCAGTTAGAGGATTCAACGTGATCGATGACATTAAAGCCAAGGTGGAGAAAGCATGCCCCGGGTTGTGTCCTGTGCTGATATTCTTGCTCTGGCTGCTCGAGACTCTGTTGTTTATGTAA 408 0.4289 MASYYFLLFVLVAATALSEADAKKKLFPDFYSSSCPELLPIVKKGVIKAMKNETRMGASLLRLHFHDCFVNGCDASILLDDTSSFIGEKTAAPNNNSVRGFNVIDDIKAKVEKACPGLCPVLIFLLWLLETLLFM 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1661 135 PANTHER PEROXIDASE 72-RELATED 19 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1661 135 Pfam Peroxidase 43 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1661 135 ProSiteProfiles Plant heme peroxidase family profile. 25 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1661 135 SUPERFAMILY Heme-dependent peroxidases 26 118 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu9g1661 135 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Ssu9g1661 135 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1661 135 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1661 135 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1661 135 Gene3D - 26 122 - -
Ssu9g1661 135 PANTHER PEROXIDASE 19 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1661 Ssu-Chr9 53472904 53473388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1661 2 118 Peroxidase AT5G58400 58.974 4.12e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1661 K00430 - mtr:MTR_3g072260 181.415