Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1660 ATGACCCTTAAAAGGCTTGAATCTAAGAAGggaaaaacatttgttttgaCGGGGCTAGGGGGGCCATCGTGGAAAGTGGGCTTGGGGAGAAGGGATTCTACCACAGCTAGCAGAGCTGATGCCAATAACTCCATTCCTGCACCCTCTCTCAATCTAACCGCTCTCAAAACGAATTTCGCTAACCAGGGGCTCTCTGTGAAGGCCTTGGTGGCTCTTTCAGGTGGACATACTATTGGCCTTGCTAGATGCGTACAATTCCGAGCACACATCTACAATGATTCCGACATTGATGCCTCCTTTGCCAAGTCCCTACAGAGCAAGTGCCCCAGAAGTGGAAATGACGATGTAGTCGCACCCCTTGACCTTCAAACTCCCACCCATTTCGATAATCTGTACTTCAAGAATTTACTGGATAAAAAGGGTCTTCTCCATTCCGACCAGGAGCTGTTCAATGGCGGTTCCACCAACAAACTGGTGAAGAAATATGCCACTAATCCAGTTGCATTCTTTAAAGCCTTTGCCAAGGGCATGGTCAAAATGAGCAAGATCAAGCCTCTCACTGGAAGCGAGGGGCAGATCAGAATCAATTGCAGAAAAGTCAACTAA 606 0.4653 MTLKRLESKKGKTFVLTGLGGPSWKVGLGRRDSTTASRADANNSIPAPSLNLTALKTNFANQGLSVKALVALSGGHTIGLARCVQFRAHIYNDSDIDASFAKSLQSKCPRSGNDDVVAPLDLQTPTHFDNLYFKNLLDKKGLLHSDQELFNGGSTNKLVKKYATNPVAFFKAFAKGMVKMSKIKPLTGSEGQIRINCRKVN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1660 201 Gene3D - 19 201 - -
Ssu9g1660 201 PANTHER PEROXIDASE 18 201 - -
Ssu9g1660 201 ProSiteProfiles Plant heme peroxidase family profile. 13 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1660 201 PRINTS Haem peroxidase superfamily signature 121 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1660 201 PRINTS Haem peroxidase superfamily signature 68 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1660 201 PRINTS Haem peroxidase superfamily signature 20 32 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1660 201 PANTHER PEROXIDASE 72-RELATED 18 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1660 201 SUPERFAMILY Heme-dependent peroxidases 18 201 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu9g1660 201 Gene3D Peroxidase, domain 2 46 180 - -
Ssu9g1660 201 Pfam Peroxidase 17 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1660 201 PRINTS Plant peroxidase signature 119 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1660 201 PRINTS Plant peroxidase signature 135 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1660 201 PRINTS Plant peroxidase signature 20 35 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1660 201 PRINTS Plant peroxidase signature 67 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1660 201 PRINTS Plant peroxidase signature 175 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1660 Ssu-Chr9 53471983 53472877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1660 16 201 Peroxidase AT5G05340 52.660 9.59e-69 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1660 K00430 - gmx:100793973 290.426