Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1657 ATGGATTGTTGTGTGTGTACAACTATGCCATTGATATTAAGGCCTCCGAGGAATACGATATGTGGGGCTTGTTACGAAGGAGTTAGGAGCATAATCAGCCTGATGAACAATGTCGAAAGTGAGAAAGTAAAAGCAGTCACTAATCCAAACAGTTCTCCAGTTTCACGGCGAAATTCGAGTAAGACACTTGATGACTGTATAAGATGGTGTTCAGAGCAGATAGACCAATTTAATCAACAAAAAGAAGACCTGGTTTTCCTCAGAGGCTTTATTGCAGCCTTCAAAGCACAGATTCACACGGATATATTGGTCTGTCCAGGCAAGCACGGTCCACCTATACCTGCACATAAGTCCGTTTTGGCGGCAAGATCAGAAATTTTTAGGAACATGCTAGAGTGCGATGAATGCAAAGCTGCACCGAGTAACAGCATAACTATACCCGATTTGAGCCATGAAGAACTAGAGTCTCTACTTGAGTTTCTGTACAGTGGGACCTTGGCTTCGGAAAAATTGGAGAAACATGTTTACGCCTTGTCACAAGCAGCTGATAAGTATGTAATCCCACATTTGCTGAAACATTGCGAACGATATCTGCTGAGTTCACTAAGCACTTCTAATGCCCTTGAGACACTAGAGATTGCTGACACTTGTTCCAACCACAACTTGAAGGAGACAACCTTAAATTTCTTAGTTAAAAACATTGAGTATATGGTGTCCACCCCTAAATTTGAAGCTTTTGTGCACAGGAGTCCACACCTAACTGTGCAACTAGTTACAAGGGCCTTCGTGAATGGTGCCAAATAA 804 0.4229 MDCCVCTTMPLILRPPRNTICGACYEGVRSIISLMNNVESEKVKAVTNPNSSPVSRRNSSKTLDDCIRWCSEQIDQFNQQKEDLVFLRGFIAAFKAQIHTDILVCPGKHGPPIPAHKSVLAARSEIFRNMLECDECKAAPSNSITIPDLSHEELESLLEFLYSGTLASEKLEKHVYALSQAADKYVIPHLLKHCERYLLSSLSTSNALETLEIADTCSNHNLKETTLNFLVKNIEYMVSTPKFEAFVHRSPHLTVQLVTRAFVNGAK 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1657 267 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 266 - -
Ssu9g1657 267 Gene3D - 204 265 - -
Ssu9g1657 267 SMART BTB_4 100 202 IPR000210 GO:0005515
Ssu9g1657 267 SUPERFAMILY POZ domain 87 201 IPR011333 -
Ssu9g1657 267 Gene3D Potassium Channel Kv1.1; Chain A 69 203 IPR011333 -
Ssu9g1657 267 Pfam BTB/POZ domain 98 201 IPR000210 GO:0005515
Ssu9g1657 267 ProSiteProfiles BTB domain profile. 100 170 IPR000210 GO:0005515
Ssu9g1657 267 CDD BACK 203 243 - -
Ssu9g1657 267 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 266 IPR044784 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Ssu9g1657 BTB 5e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1657 K10523 - gmx:100777561 492.656