Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1654 ATGTCTCCGGCGGCCGGAGTCAGCGTTCCCCTCTTGGGGGAATCCAAAGCAGCGGCAGCGCCGGCGTCGGTCCCTGGCGCGGTGTTCAATGTGGCGACCAGCATAGTCGGCGCCGGAATCATGTCTATTCCGGCAATTATGAAGGTTCTCGGCGTGGTTCCGGCTTTCGCCATGATTCTCGTCGTGGCCGTGCTCGCGGAACTCTCCGTCGACTTCCTCATGCGCTTCACGCACTCCGGCGAAACGACGACGTACGCCGGCGTCATGAGGGAAGCGTTCGGATCGCCGGGAGCGTTGGCCGCGCAAATCTGCGTCATAATCACCAACGTTGGGGGTTTAATTCTCTACCTTATTATCATCGGGGATGTACTGTCTGGAAAGCAAAATGGAGGTGAAGTGCATTTGGGCATTTTGCAACAATGGTTTGGAATTCACTGGTGGAATTCCCGGGAATTTGCTTTGCTTTTCACCTTGGTCTTTGTTATGCTTCCATTGGTATTGTACAAACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTGTCAACTCTTCTTGCAGTGGTATTTGTTGGCATATGTTGTGGGTTGGCTATTACTGCTCTGGTGCAAGGAAAAACACAAACTCCTAGATTGTTTCCTCAGTTAGACTACCAAACCTCATTCTTTGATCTGTTCACTGCAGTTCCTGTTGTTGTCACAGCATTCACATTTCATTTCAATGTGCATCCCATTGGGTTTGAGCTTGCCAAGCCATCCCACATGACAACCGCAGTTCGATTAGCATTATTGCTTTGTGCTGTGATCTACCTTGCAATAGGCCTATTTGGGTACCTGTTATTTGGGGATTCAACCCAGTCAGACATTCTCATCAATTTTGACCAGAATACTGATTCTGCGGTTGGTTCCTTGTTAAATAATTTGGTCCGTGTAAGCTATGCACTCCACATCATGCTGGTGTTTCCTCTCTTGAACTTCTCTTTGAGAGCCAACATAGATGAAGTTCTCTTCCCCAAGAAGCCTATGTTAGCCACAGACAACAAAAGATTTGTGATCCTCACTCTGGCTCTGCTTGTATTCTCCTACCTTGCAGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTTCTGGGATCAACATCCGCAGTGTGCCTTGCCTTCATTTTCCCCGGCTCTATTGTTTTAAAGGATGCTCATGGTATATCAACAAGAAGGGACAAAATTATAGCACTGATCATGATTATACTAGCTGTGGTGACAAGTGTGCTTGCCATTTCCACCAACATATATAATGCTTTTAGCAGCAAGTCATAA 1311 0.4714 MSPAAGVSVPLLGESKAAAAPASVPGAVFNVATSIVGAGIMSIPAIMKVLGVVPAFAMILVVAVLAELSVDFLMRFTHSGETTTYAGVMREAFGSPGALAAQICVIITNVGGLILYLIIIGDVLSGKQNGGEVHLGILQQWFGIHWWNSREFALLFTLVFVMLPLVLYKRVESLKYSSAVSTLLAVVFVGICCGLAITALVQGKTQTPRLFPQLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKPSHMTTAVRLALLLCAVIYLAIGLFGYLLFGDSTQSDILINFDQNTDSAVGSLLNNLVRVSYALHIMLVFPLLNFSLRANIDEVLFPKKPMLATDNKRFVILTLALLVFSYLAAIAIPDIWYFFQFLGSTSAVCLAFIFPGSIVLKDAHGISTRRDKIIALIMIILAVVTSVLAISTNIYNAFSSKS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1654 436 Pfam Transmembrane amino acid transporter protein 22 425 IPR013057 -
Ssu9g1654 436 PANTHER AMINO ACID TRANSPORTER 3 434 - -
Ssu9g1654 436 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1654 Ssu-Chr9 53382411 53386196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1654 9 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 61.848 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1654 - - gmx:100815694 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1654 9 53382411 53386196 Ssu6g3099 6 70507566 70532972 PCT
Ssu6g3100 6 70539753 70542367 Ssu9g1654 9 53382411 53386196 PCT