Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1648 ATGTCAAATGCAAAATACAAGGCCAGCCTCTTATTCTCTCCTGTATACTTCATGGGTTTAGAGCACTGCtatcctttctctttcttcatccTCTTGTTTTTCTCAAGAAAAAGTACTTTTAACAATAAACACAAGAACaacaaagttttatttttccccTTGATAGTCACATATATGGCCGCTGTATCTGAATATGCAAACAAGACATTGATATGCCAAAATCCCCACAGTTATGGTCATTTGGATATCTGGCACTTAGGCAACCCATTGGAATCCCCCACTTGTCTTCTCTTTATGCAGGTCTCTTTGATTACCGTAGTCACACAGTTCATAGACATATGTCTCAAGCCACTAGGACAATCCTCCCTTGTATCCCAGATTCTTGGTGGAATGGTGTTTGGGCCATCAGTTTTGGGGAACAAAAAGATTCTGGGCCAAACCTTATTCCCTGTAAAGGGTGCTGTAGTGCTTGAAACAGTTGCATCGTTTGGCCTCATGTTCTTCTACTTTGTATGGTGTGCTAAAATAGATCTTGCCACATTGTACAAGACAGAAAAGCTGGCCATCACTCTTGGTTTTTCTGTATTCTCATTTACATTGGTAATCCCTACTGGACTGTCCATGCTGTTGAAGAAATATGTGACAATGGACGAGAGCCTCGCAAATGCACTGCCGTTTGTAGCTCTCTCACAAACCTTAACTGTGTTTATTAGCATAGCAGTCCTGTTGACAGATCTCAAAGTCCTTAACACTGATATAGGACGTTTAACCATGTCAGCAGCAATGTTTGCTGATACTGCTGGCTTTACTGTGGCAGTGCTTATGTTTGCAATTCTGCAGAATAAGAGTGGTAGCTTTCTGACATTAGCATTCATCATTCTATCCATAATTGCACTCTTGCTTGTTATTGTATTTGTAATGAGGCCAGCAATACTTTGGATGGTTAAGCACTCAGGTGGCGGTTCGGTTAATGAAATATGCGTTCTTTGCATCTTTCTCTTCGTTCTCTTAACTGGACTTCTCAGTGAATTAATTGGGCAGCATTTTGCCATGGGACCAATAATTTTAGGCCTGGCTCTTCCAGAAGGGCCACCCTTAGGAACAGCTTTGATGAGTAAATTGGAGACAATCTGTTTGGCATTTCTTTATCCACTCTACCTTGCTGTTAATGGATTGCAAACAGATATCTTCAAAATCAACATGCAGTCTGTGTGGATTGTGTGTGTCATACTGGTCGTGGCTTTCTTTGTAAAGATTGGTGCTGTCATGTTGCCAGGATACTATTACAATCTACCCATGAAAGAATGTTGTATCGTTGGCCTCCTTCTAAATGGAAGGGGTATAGCTGAGCTTAACATGTACTATTTGTGGATGGGAAACAAGCTACTATCGGAACAAGAGTTCTCTTTGATGGTGGTCTCCATTCTAATAGTAAATGCTATCATAGCACCActcataaaattcatatatgatCCTTCAGAGCAATATCAGACCGGAAGAAGATGCACAATTCAACATACTAGGCGAGATTCTGAGCTTCGAGTCATGGTGTGCATTCACAACAATGAAAACCTCCCCACAATCCTCAACCTCTTAGAAGCATCCTATGCAAGCAGAGAGAGCACGGTTGCGGTTACAGCATTAGTCCTAGTGGAGCTTCATGGAAGAGCAAGGCCTATTCTTGTTGCTAACCAACCCCATGATAGCCTGCGCTCAGTGTCATGCAATGCAAATCACATTGACAATGCCCTGAGGCAATATGCACAGCAGAATGAAGGATGTGTATCTGTTCAATCTTTCACTTCAATCTCCACCTTTGACACTATGTACGATGACATATGCCGAATGTCACTTGATAGTGGAGCCAACATTTTGATCATGCCATTCCACAAGAGGTGGGAAATTGATGGCACCGTTGAGGTTTCACATAGGTCCATCCAAACCATGAACATTAAAGTCCTCGAAAGGGCTCCATGTTCAGTGGGAATTCTAGTTGATAGGGGCATCTTGAGTACTTCTCCATCACTCTTAATGGCTAGAGCAACATACTATGTTGCTGTGTTCTTCATTGGGGGTGTGGATGATGCGGAGACACTAGCCTATGGTACTAGAATGGCTAGGCATGAGTGTGTGTATGTAACGGTGGTTAGGTTCCTTCTATTTGGAGAAGAAAATTCCAAGGACAGAAAGCGTGACAGTGATCTAATAGACGAATATAGATACTATAATGCTGGAAATCGTAGGTTTGAGATTTTGGATGAAGTGGTGAAAGATGGGATAGAGATGTCCACGTGTATAAGAAGGTTGATAGATTATTTTGATCTAGTGATGGTGGGGAGGGAGCATCCAGAGAGTGTTATGTTTCAGGGACATGACCAATGGAGCGAGTGTCAAGAGCTAGGGGTCATTGGGGACATGCTAGCATCACCCGATTTTGTGACCAAGGCATCGGTGCTGGTGGTGCAACAACACAGAATTAGAGGGAGGTTTGTTAAACACAATGTGAATGTGAACCCAATGCCAAATCACAGAGATCAGCCCGGATATGATGTTCCAATTGATCAAACATTGAGTCCTTCTTGTACTATTTCTATGGACAAATATGACAGAATGTAG 2616 0.414 MSNAKYKASLLFSPVYFMGLEHCYPFSFFILLFFSRKSTFNNKHKNNKVLFFPLIVTYMAAVSEYANKTLICQNPHSYGHLDIWHLGNPLESPTCLLFMQVSLITVVTQFIDICLKPLGQSSLVSQILGGMVFGPSVLGNKKILGQTLFPVKGAVVLETVASFGLMFFYFVWCAKIDLATLYKTEKLAITLGFSVFSFTLVIPTGLSMLLKKYVTMDESLANALPFVALSQTLTVFISIAVLLTDLKVLNTDIGRLTMSAAMFADTAGFTVAVLMFAILQNKSGSFLTLAFIILSIIALLLVIVFVMRPAILWMVKHSGGGSVNEICVLCIFLFVLLTGLLSELIGQHFAMGPIILGLALPEGPPLGTALMSKLETICLAFLYPLYLAVNGLQTDIFKINMQSVWIVCVILVVAFFVKIGAVMLPGYYYNLPMKECCIVGLLLNGRGIAELNMYYLWMGNKLLSEQEFSLMVVSILIVNAIIAPLIKFIYDPSEQYQTGRRCTIQHTRRDSELRVMVCIHNNENLPTILNLLEASYASRESTVAVTALVLVELHGRARPILVANQPHDSLRSVSCNANHIDNALRQYAQQNEGCVSVQSFTSISTFDTMYDDICRMSLDSGANILIMPFHKRWEIDGTVEVSHRSIQTMNIKVLERAPCSVGILVDRGILSTSPSLLMARATYYVAVFFIGGVDDAETLAYGTRMARHECVYVTVVRFLLFGEENSKDRKRDSDLIDEYRYYNAGNRRFEILDEVVKDGIEMSTCIRRLIDYFDLVMVGREHPESVMFQGHDQWSECQELGVIGDMLASPDFVTKASVLVVQQHRIRGRFVKHNVNVNPMPNHRDQPGYDVPIDQTLSPSCTISMDKYDRM 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1648 871 Pfam Sodium/hydrogen exchanger family 105 483 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu9g1648 871 PANTHER CATION/H + ANTIPORTER 64 838 - -
Ssu9g1648 871 Gene3D - 95 498 IPR038770 -
Ssu9g1648 871 PANTHER CATION/H(+) ANTIPORTER 15-LIKE 64 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1648 Ssu-Chr9 53302353 53305884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1648 67 824 Antiporter Super Family AT2G13620 34.689 1.60e-150 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1648 - - gmx:100779700 1324.69