Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1638 ATGGATGTAATGACGACATTAAAAGCAGCGAAACGTTGTTGGCGATTTGGTGTATTTCCCTTCTTGTCTTCCTTTTTCGTCACAGTAACCCTGTTGGCTTTGTATTCGCCCCATGGCGctaatcaaatttcattttacaaCTTCCCCAACATCTTCACCTTAAGCAGTTTCGCTGTTGTATCTGAAACCTTAACGGAACTCAACCTCGTAGCCACGGAAATTGggcagattgctttatcttcagCCATGATCAGCGAAATATTGCAATGGATTACGATGGAGCTTCATTTCAACTCATCAGGTCCCAACGGACAACTGACCCTTCAACTTTTGCTAGGTTGCTGCGGATTCGCTGTGTTATGTCTTTTCATTATACGACCACTAGTGAATATTGTTGTTGAGAGAACACCACCGGGGAAACCAATGAAAGAAATATACGTTGTCATGATACTTCTGGGTGTCCTAGTTATGGCAGGTATTAGTGACATCTTTGGCATATATTTCATTATGGGACCTATCCTTTATGGTTTCGTTCTGCCCAATGGACCCCCCCTGGCGACAACAATTATAGAGAGAAGCGAATTGCTCgtcaaagaattttttatgcctttcttcttcttacatatagGCACAAGGACAGATTTGACTAAAATTCCTAATGATTGGAAGGAGATTCTAACATTTCAGGCTATCTTATTTGTGGGATTCTTGGTTAAGGTACTTGCATGTGTGCTCGTTTCTCCCACATATAACATTAAGCTCAAACATGGCGTCGTGCTTGGGCTCATATTGAACGTCAAGGGTATAATCGAACTGATCTTTTACAGTAGAATGTATAAACTTGAGGTTATTGATACAGAAATATATGGTGTAGCGGTGGTGTATGTCCTGTCTATAACATCACTGTGCATACCCTTGATCAAATCCTTGTACAGGCATCGTCGGGTGTTGAAGACGCCAACCATACACGAAGGGAGTGTGAGAACAATCCAAAACATTTCTGAAAACACAGAGTTTCGCATCGTTTCATGTGTACACACGGATGAACACGTGCACAGCATGATTGCCCTAATAGAGGCATGCAACCCAACCACACAAAGCCCCATATGCGTCTTCGTGGTTCATCTCATTGAGCTCTTCGGCAAAAGCACGCCCATTCTTCTTCCCATGAACAAGCGCAACAGAAAATCTCTGTCCGTGAACTACCCCAACACCAACCACATTTTGCGTGCCTTTGAGAACTACTCCAACAACTCAAGCGGCCCAGTAACCATTCTTTCACACGTCAACGTGGCCCCTTACAAGAGCATGCACGAGGCAGTTTGTAACCTCGCTGAAGATAGCTCGGTGCACCTTCTCATTGTCCCATTTCACCAAAATGATCAAACTATGTGTAGCCACGTGGCCACCACCATTCGCGACCTCAACACAAGCTTTCTCGCTAATGCAACGGGTACGGTGGGGATACTCGTAGATAGATACTCAGTACTGAGTGGGAGTAGCTCCAAGTTGTCTTTTCATGTGGGTATCTTCTTCATTGGTGGAAAAGACGACAGAGAAGCATTGGCGTTGGGTATTCGAATGTTGGAGCGTCCGAATACACGCGTCACCTTGTTCCGGTTCGTTTTGCATGACAAAAATGATTCGGGGTTTGTTATAGATAGGtttgtagaaaatgaagagGAAAAGTTAGAGAGCACGTTGGACGAGAGTTTGATAGATGAATTTAAGgccaataatattattagtagtGATAGTGTTAACATTGTTTACCATGAGGTTGTGGTGGAAGATTGCATACAGGTGTTGGAAGCGATTCGGGGAATGGAGAGCGACTATGACCTTGTGATGGTGGGAAAGAGACATAGCATGGGGGATTTGACGGAAGAAGAAATGTCAAATTTCATGGACAATGCGAATCAGTTGGGAATTTTTGGGGATATGTTGGCATCCAATGAGTTTTGTAATGGGAAGGTTCCCGTATTGGTGATGCGATGCGGTGAGCAGCGGGTAGAACAGTTAGAAAAGGTTGGCCCCTGCCCACCTCCCCTATAA 2055 0.4224 MDVMTTLKAAKRCWRFGVFPFLSSFFVTVTLLALYSPHGANQISFYNFPNIFTLSSFAVVSETLTELNLVATEIGQIALSSAMISEILQWITMELHFNSSGPNGQLTLQLLLGCCGFAVLCLFIIRPLVNIVVERTPPGKPMKEIYVVMILLGVLVMAGISDIFGIYFIMGPILYGFVLPNGPPLATTIIERSELLVKEFFMPFFFLHIGTRTDLTKIPNDWKEILTFQAILFVGFLVKVLACVLVSPTYNIKLKHGVVLGLILNVKGIIELIFYSRMYKLEVIDTEIYGVAVVYVLSITSLCIPLIKSLYRHRRVLKTPTIHEGSVRTIQNISENTEFRIVSCVHTDEHVHSMIALIEACNPTTQSPICVFVVHLIELFGKSTPILLPMNKRNRKSLSVNYPNTNHILRAFENYSNNSSGPVTILSHVNVAPYKSMHEAVCNLAEDSSVHLLIVPFHQNDQTMCSHVATTIRDLNTSFLANATGTVGILVDRYSVLSGSSSKLSFHVGIFFIGGKDDREALALGIRMLERPNTRVTLFRFVLHDKNDSGFVIDRFVENEEEKLESTLDESLIDEFKANNIISSDSVNIVYHEVVVEDCIQVLEAIRGMESDYDLVMVGKRHSMGDLTEEEMSNFMDNANQLGIFGDMLASNEFCNGKVPVLVMRCGEQRVEQLEKVGPCPPPL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1638 684 Pfam Sodium/hydrogen exchanger family 17 299 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu9g1638 684 PANTHER CATION/H+ EXCHANGER 3 1 669 - -
Ssu9g1638 684 Gene3D - 1 318 IPR038770 -
Ssu9g1638 684 PANTHER CATION/H + ANTIPORTER 1 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1638 Ssu-Chr9 53104477 53106862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1638 1 665 Antiporter Super Family AT2G13620 32.319 4.46e-112 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1638 - - gmx:100781310 970.689