Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1587 ATGGAGGATCAATATTTAAAACGACGCGTAACTACAGGATGTTATAACGTAGATGTGTCAAATCCCAATTCAGTATGGAAAAGTGAAACAGTCCTTTTTTTCTACCTTCCTACCTTTGCAGCCCaagttagttttatgttgttctCCACTCGTACTTTGTACTATATCCTTAGACCCTTAAACCAACCTCGTCTTGTTGCTGAGATTTTGATGGGTATTCTGATAAGTCCAGAATTATTTGGATCATCCGCTTTATCTGATGTTCTCACCCCTCTAAAGTCAATCCTAACTACAGAAACCATATCATATGTGGGACTCGTTTACTCTGTCTTCCTGGCTGGCTTGGACATGAACTTTGACACAATCCTAGGAGCAAGTAGGAAGGCCACAAGCATTGCCATTGCTGGCATTTTCATTCCAATGGTATTGGGGGGTTGCATATATGCTTTGGCTCAAAATATGTACAAGGGACCTCCAGAGTATTTGTCAGAATTCAATACAACTGAGGCATATTTGTTTTGGACCTTAATTTTTAGTGTCACTGGTTTTCCTATGGTTAGTCACATCCTTGCAGATCTCAAGCTCCTCTATACAGGACTTGGCAGAGTGGCCTTAAACACAGCCATGATCAGTGACTTCTATAATTGGGTCATGTTTGCACTGTTGATTCCATTTGCCATTAACGGTGGAAGTGCCATCTACTCGGTGCTCAGCACCGTAGGTTTTGTCCTTTTCTGCTTCATTGTTATACGCCCTTATTTGGTGCAGTTAATAGTGCGCAAAACCAATCAAAATGAGTGGGACAATTACGGGTTTTTCTATGTGATCATGGGAGCTTATGCTTGTGCACTCGTTACAGATCTCTTAGGGACACACCCTGTTGTTGGGGCTCTGGTGTTTGGAATAATGATACCTCGTGGTAAATTTACTCAAATGCTGATAGAGAAGTCAGAGGATTTTGGGGTTGTTTATCTGGCTCCATTGTTCTTTGGTAGTAGTGGCATAAGACTCAGAacaatatatgttataaaaactCAAGGTATAGGCCTGGTGCTTTTAATTTTGCTCCTGTCATGCATCCCAAAGATTTTAAGCACTGTAATAGCGACTGGGTTTCATGGTATGTCTGTTCTTGATGGTGTGGCTATTGGACTGCTTATGAACGCCAAGGGCATCTTACCAATATTAATGCTCAACAGTGCCTGGGACAAGCAGATTTTGAGTGTGGAGTCCTTCTCAATTTTGACGATAGCTGTTCTTATAATGACCATGATAGTGCCTCTTATCATCAATGCCATATACAAGCCAAGAAAGctatataagcaaaataaactGAAGACTATACAGAATTTAAAGGCCGAAGCAGAGCTGCGAATACTAGCTTGTGTCCACAACCCTCGCCAAGCCACCGGAATGCTCAGCATCTTTGAAGCATGCCATACCACAAAACTCTCCCCTCTACGTGTGTTTGCACTTCAGCTTGTTGAACTAAGTGGAAACACCACTTCCCTTTTGGCTGCACATATCAACCAGCACAATCAACAGCAATGCGGTGCACAAGGCCTCACCAAAGCACAAGAAGACTTGGAAAGCATCACCAACATTTTCCAAACATACACAGATGCAAATGAGAACACTAGTGTGGAGACCTTTGCTGCTGCATCCACCTATTCAACCATTCATGAGGACATATACAATGTGTCACAAGAGAAACTTGCAAACCTGATCCTACTTCCTTTCCACAAACAATCAAACATAGAGGGTATTCTAGAGATAACCAACACTGTATTCCAAGACGTAAACCGAAATGTCATGAGAGATGCACCTTGTTCTGTGGGAATCTTTGTTGACCGTGGACTTGGGTCATTGTTCAAAGTCAACTTGCGTGTGCTTATGCTTTTCATTGGAGGCCCTGATGACCGTGAAGCCTTGGCTGTTGCATGGAGAATGTCAAAGCATCAAGGGGTTCAACTATCTGTGGTGAGGATCCTTATGTTTGGGGAGGCTGCAGAAGTGGATGTTTTTTCCCATGTTGAGCCTCGTGGACTATTATCTGTGGTACTAGACAATGAAAAGCAAAAGGAGTTGGATGATGAGTATGTGAGTTCATTTAGACTCAAGGCAGTGAGCAATGAGGATTCTATTAAGTATTCAGAAAATGAAGTTCGTTCTAGTGAAGGTATTCCTGAAGTGCTTAATGAGTTGGACCAAATTGGGTATGATTTGTATATTGTAGGACAAGGGGCAGGTAGGAACTATTTCATCTTGTCAGAGTTAATGAAATGGACTGATTGCCCGGAACTTGGTGTTATAGGGGACATGGTGGCGTCAGATAATTTTGGTTCATGCTCTTCACTGCTTGTTGTACAGCAATATGGGTCTGGCGGAATGGTATTTGAGAATAGTAATGCCACACAGCATACTAGTGAAGCAGTGTCTCCAAACAATGATGAATCTGGGGCGCTTTCTGTGAAGATAGAATAG 2484 0.4163 MEDQYLKRRVTTGCYNVDVSNPNSVWKSETVLFFYLPTFAAQVSFMLFSTRTLYYILRPLNQPRLVAEILMGILISPELFGSSALSDVLTPLKSILTTETISYVGLVYSVFLAGLDMNFDTILGASRKATSIAIAGIFIPMVLGGCIYALAQNMYKGPPEYLSEFNTTEAYLFWTLIFSVTGFPMVSHILADLKLLYTGLGRVALNTAMISDFYNWVMFALLIPFAINGGSAIYSVLSTVGFVLFCFIVIRPYLVQLIVRKTNQNEWDNYGFFYVIMGAYACALVTDLLGTHPVVGALVFGIMIPRGKFTQMLIEKSEDFGVVYLAPLFFGSSGIRLRTIYVIKTQGIGLVLLILLLSCIPKILSTVIATGFHGMSVLDGVAIGLLMNAKGILPILMLNSAWDKQILSVESFSILTIAVLIMTMIVPLIINAIYKPRKLYKQNKLKTIQNLKAEAELRILACVHNPRQATGMLSIFEACHTTKLSPLRVFALQLVELSGNTTSLLAAHINQHNQQQCGAQGLTKAQEDLESITNIFQTYTDANENTSVETFAAASTYSTIHEDIYNVSQEKLANLILLPFHKQSNIEGILEITNTVFQDVNRNVMRDAPCSVGIFVDRGLGSLFKVNLRVLMLFIGGPDDREALAVAWRMSKHQGVQLSVVRILMFGEAAEVDVFSHVEPRGLLSVVLDNEKQKELDDEYVSSFRLKAVSNEDSIKYSENEVRSSEGIPEVLNELDQIGYDLYIVGQGAGRNYFILSELMKWTDCPELGVIGDMVASDNFGSCSSLLVVQQYGSGGMVFENSNATQHTSEAVSPNNDESGALSVKIE 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1587 827 Gene3D - 38 443 IPR038770 -
Ssu9g1587 827 Gene3D - 452 766 - -
Ssu9g1587 827 PANTHER CATION/H + ANTIPORTER 4 827 - -
Ssu9g1587 827 Pfam Sodium/hydrogen exchanger family 47 433 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu9g1587 827 MobiDBLite consensus disorder prediction 805 820 - -
Ssu9g1587 827 PANTHER CATION/H+ EXCHANGER 3 4 827 - -
Ssu9g1587 827 MobiDBLite consensus disorder prediction 805 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1587 Ssu-Chr9 52194995 52198172 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1587 14 792 Antiporter Super Family AT2G13620 36.742 3.05e-176 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1587 - - gmx:100802381 1341.64