Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1574 ATGGAAGAGGACATGTCAGGCTTTTGTTTTAGAGGTGGAAGTGTTGGTGGTAACAGTGGCAGTGCTACTGGCACTAAGTGTGGGCGTTGGAATCCCACTACTGAACAGGTTAAGGTTCTGACTGAACTGTTCAGTTCTGGACTCCGCACCCCAAGCACTGATCAGATTCAGAAGATCTCTAATCAGCTTAGTTTTTATGGTAAGATTGAGAGCAAGAATGTGTTCTATTGGTTTCAGAACCATAAGGCTAGGGAAAGACAGAAACGTCGCAAGGTCTCCTTTGACGATAATAAGGATGTGATTCGTAGAGAAAACTCTGTCCCCATGAATTCTTTTACACAAAATTTTACTCAGCTGTATCAGGTTTCTGAGCCCGAGAGGGTGATTGAGACTCTTCAACTCTTCCCCTTGAACTCCTTTGGTGAATCGGAATCAAAGAATATGAGGGTTCATGCAAGTGAATGCAGGGATAATACAATGTTTTCATACACAGTGGGGGAACAAATGGATCACCCACCGTTGGATCTTCGCTTGAGTTTTATGTGA 546 0.4341 MEEDMSGFCFRGGSVGGNSGSATGTKCGRWNPTTEQVKVLTELFSSGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQKRRKVSFDDNKDVIRRENSVPMNSFTQNFTQLYQVSEPERVIETLQLFPLNSFGESESKNMRVHASECRDNTMFSYTVGEQMDHPPLDLRLSFM 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1574 181 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Ssu9g1574 181 Gene3D - 26 94 - -
Ssu9g1574 181 SUPERFAMILY Homeodomain-like 28 90 IPR009057 -
Ssu9g1574 181 SMART HOX_1 25 92 IPR001356 GO:0003677
Ssu9g1574 181 CDD homeodomain 29 89 IPR001356 GO:0003677
Ssu9g1574 181 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 170 - -
Ssu9g1574 181 Pfam Homeodomain 27 87 IPR001356 GO:0003677
Ssu9g1574 181 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 170 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1574 Ssu-Chr9 51974549 51975328 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1574 8 181 Wox Gene Family AT3G11260 54.787 4.40e-61 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Ssu9g1574 Homeodomain 2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1574 - - gmx:100791433 317.39