Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1571 ATGGAGGGAAAGGAGCAAGATGTTTCGCTGGGAGCCAACAAATTCCCGGAGAGGCAACCCATTGGAACTGCGGCTCAGAGCCAAGACGATGGAAAGGACTACAAAGAGCCACCACCGGCTCCACTATTCGAGCCCTCCGAACTCATCTCTTGGTCCTTCTACCGAGCCGGGATAGCTGAGTTCGTAGCCACTTTTTATTCCTATATATTACCATCTTGA 219 0.5114 MEGKEQDVSLGANKFPERQPIGTAAQSQDDGKDYKEPPPAPLFEPSELISWSFYRAGIAEFVATFYSYILPS 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1571 72 MobiDBLite consensus disorder prediction 1 40 - -
Ssu9g1571 72 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 66 IPR034294 -
Ssu9g1571 72 PANTHER PLASMA MEMBRANE INTRINSIC PROTEIN 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1571 Ssu-Chr9 51953641 51953859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1571 1 65 Major Intrinsic Protein MIP AT4G00430 84.615 6.05e-35 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1571 K09872 - lja:Lj0g3v0015829.1 129.798