Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1567 ATGCCATCGCTAGTGGGCACAGCTGCGTCTCAGGGTGTTTACTATTATTTCTATCAAATATTTAGGAACAAAGCTGAAGCGGCTGCACTACAACAGAAGAAAATGGGCATCGGTGATGGATCAGTTGGGATGCTCTCCTCACTTCTTGTTGCAGCTTTATCTGGGTGTGTTAACGTGCTCCTGACAAATCCCATATGGGTAGTTGTTACCCGTATGCAGACACATAGAAAAGAGTTGAATGGAACTCCATCTGATCAGGGATTGTTAGTTGCCACTGAGCAACCAATTCTTTCTGCAATTGAGCCTCTTCCTTATGGAACTAGCCATGTGATTCAAGAAATCTATGATGAAGCTGGAATTTGGGGTTTCTGGAAAGGTGTATTACCAACATTGATCATGGTAAGCAATCCTTCCATACAGTTCATGCTGTATGAAGCCATGTTGACGAAGTTAAGAAAAAGACATGCTTTGAGTCATAAGGGTAGCAACAGGGTAACTGCTTTAGAGATATTTCTTCTTGGAGCTTTAGCTAAGCTTGGAGCTACTGTTGTAACTTATCCGCTCCTAGTTGTAAAGGCAAGGCTCCAAGCTAGACAGGATAAAACTGGAGACAGGAGGCACCATTATAACGGTACGTGGGACGCTATTATTAAGATGATCCACTATGAAGGGTTTTATGGGTTTTACAAAGGCATGGGCACAAAAATTGTACAAAGTGTGCTGGCTGCTGCTGTTTTGTTCATGATGAAGGAAGAACTAGTTAGGGGGGTTCATTTCTTACTTGCCAAGAATGCTGCCAATGCTGTAAAGCCAAAGCATCTGTGA 825 0.4279 MPSLVGTAASQGVYYYFYQIFRNKAEAAALQQKKMGIGDGSVGMLSSLLVAALSGCVNVLLTNPIWVVVTRMQTHRKELNGTPSDQGLLVATEQPILSAIEPLPYGTSHVIQEIYDEAGIWGFWKGVLPTLIMVSNPSIQFMLYEAMLTKLRKRHALSHKGSNRVTALEIFLLGALAKLGATVVTYPLLVVKARLQARQDKTGDRRHHYNGTWDAIIKMIHYEGFYGFYKGMGTKIVQSVLAAAVLFMMKEELVRGVHFLLAKNAANAVKPKHL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1567 274 SUPERFAMILY Mitochondrial carrier 2 252 IPR023395 -
Ssu9g1567 274 ProSiteProfiles Solute carrier (Solcar) repeat profile. 165 256 IPR018108 -
Ssu9g1567 274 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 272 - -
Ssu9g1567 274 Pfam Mitochondrial carrier protein 166 255 IPR018108 -
Ssu9g1567 274 Pfam Mitochondrial carrier protein 42 154 IPR018108 -
Ssu9g1567 274 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 272 IPR044712 GO:0006862|GO:0055085
Ssu9g1567 274 Gene3D Mitochondrial carrier domain 1 257 IPR023395 -
Ssu9g1567 274 ProSiteProfiles Solute carrier (Solcar) repeat profile. 42 150 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1567 Ssu-Chr9 51841271 51846034 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1567 62 255 Chloroplast and Mitochondria Gene Families AT2G47490 32.821 1.45e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1567 K13354 - gmx:100775784 488.804