Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1533 ATGGCTAGTCATGATAGAGTGGTAGCTGTCTTTCCTAATAAAAAGAAGCAGCTCCATACAACAAGGTCATGGGATTTTATTGGCTTTCCACTACAAGCAAATAGAGCAGCAGCTGAAAGTGATATCATCATTGGAGTACTTGATTCTGGAATCTGGCCAGAATCTGACAGCTTCAAGGACAAAGGATTCGGTCCACCACCTAGTAAATGGAAGGGCACCTGCAAAACTAATAATTTCACATGCAATAAGTTTTGCTTCAGCGGTTCGTTGGACCAAAAATTAGTTAAGGGTAAAATTGTTCTCTGTGAGAGCAGAAGCAAAGCGTCAGGCCCTTTTGATGCTGGTGCTGCTGGGGCATTGATACAAGGTCAAGGTTTTAGAGATCTTCCTCCCTCTCTTCCATTGCCTGGATCTTACCTTGATTTGCAGGATGGTGCCTCCGTATTTGACTACATAAACTCTACAAGGACTCCAACTGCAACCATATTTAAGAGTGATGAGATAATAGATACAATAGCCCCTGTTGTGGCCTCTTTCTCTTCAAGGGGTCCAAACATTGTTACACCTGAAGTTCTCAAGCCGGATTTAGTGGCTCCTGGAGCTGCCATTCTAGCTAGTTGGTCTCCAGCTTCCCCTCCTTCAGATGTTGAAGGTGACAACAGaacattaaatttcaatattatctcAGGAACTTCAATGTCTTGTCCCCATGTTTCTGGGGCAGCAGCGTATGTTAAATCATTCCATCCAACATGGTCTCCTGCTGCTATTCGTTCAGCTCTGATGACAACAGCTAAACAACTTAGTCCCAAGACTAACCCTCACGCAGAATTCGCATATGGCGCAGGCCAAATTGATCCTTCTAAGGCTGTGTACCCCGGTTTAGTATACGATGCTGATGAAATAGACTATGTAAGGTTTTTATGTGGACAAGGCTATAGTTCAAGGACTTTACAACTCATCACAGGGGACAACAGTAGCTGCTCTGAAACAAAGTATGGTTCAGCAAGGGATCTAAACTATGCTTCATTTGCTCTTTCTGTCCCACGCTCCAACTCCAGTGTAAGTGGCAGTTTTAACAGGACTGTTACAAATGTTGGGTCAGCAACGTCCACATATACAGCTACTGTGACTGCTCCTCAAGGACTAAAAATTGAGGTGAACCCCCGAGTTCTATCATTCACTGCTCTTGACCAAAAGAAAACATTTGTCCTCACAATTGAGGGaacaatagaagaacccacaGTGTCAGCCTCTTTGGTTTGGGATGATGGTAAGTTCCAAGTGAGGAGCTCCATTGTAGTGTTTAATTCAGCATAA 1320 0.4265 MASHDRVVAVFPNKKKQLHTTRSWDFIGFPLQANRAAAESDIIIGVLDSGIWPESDSFKDKGFGPPPSKWKGTCKTNNFTCNKFCFSGSLDQKLVKGKIVLCESRSKASGPFDAGAAGALIQGQGFRDLPPSLPLPGSYLDLQDGASVFDYINSTRTPTATIFKSDEIIDTIAPVVASFSSRGPNIVTPEVLKPDLVAPGAAILASWSPASPPSDVEGDNRTLNFNIISGTSMSCPHVSGAAAYVKSFHPTWSPAAIRSALMTTAKQLSPKTNPHAEFAYGAGQIDPSKAVYPGLVYDADEIDYVRFLCGQGYSSRTLQLITGDNSSCSETKYGSARDLNYASFALSVPRSNSSVSGSFNRTVTNVGSATSTYTATVTAPQGLKIEVNPRVLSFTALDQKKTFVLTIEGTIEEPTVSASLVWDDGKFQVRSSIVVFNSA 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1533 439 PRINTS Subtilisin serine protease family (S8) signature 39 58 IPR015500 -
Ssu9g1533 439 PRINTS Subtilisin serine protease family (S8) signature 229 245 IPR015500 -
Ssu9g1533 439 Pfam Subtilase family 176 283 IPR000209 GO:0006508|GO:0008236
Ssu9g1533 439 Gene3D - 84 169 - -
Ssu9g1533 439 Gene3D - 308 437 - -
Ssu9g1533 439 Gene3D Peptidase S8/S53 domain 41 83 IPR036852 GO:0004252|GO:0006508
Ssu9g1533 439 Gene3D Peptidase S8/S53 domain 170 304 IPR036852 GO:0004252|GO:0006508
Ssu9g1533 439 ProSiteProfiles Serine proteases, subtilase domain profile. 1 291 - -
Ssu9g1533 439 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 82 436 IPR045051 -
Ssu9g1533 439 Pfam PA domain 74 134 IPR003137 -
Ssu9g1533 439 ProSitePatterns Serine proteases, subtilase family, serine active site. 230 240 IPR023828 -
Ssu9g1533 439 Pfam Fibronectin type-III domain 338 435 IPR041469 -
Ssu9g1533 439 PANTHER PUTATIVE-RELATED 82 436 - -
Ssu9g1533 439 PANTHER PUTATIVE-RELATED 4 83 - -
Ssu9g1533 439 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 83 IPR045051 -
Ssu9g1533 439 SUPERFAMILY Subtilisin-like 25 292 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1533 Ssu-Chr9 51277834 51280757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1533 1 82 Subtilisin-like Serine Gene Family AT3G46850 59.770 9.86e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1533 - - gmx:547512 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2972 6 68146864 68147430 Ssu9g1533 9 51277834 51280757 PCT