Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1498 ATGTACGTGGGGTTCTCTTCTTCAACAGGGTTACTCTCGAGCTCGCACTATATCCTCGGTTGGAGCTTTAAAATAAACGGAGAGGCCAAAACCCTGTCCCTAGAAAACCTCCCTTCACTCTCTGCATCCAACAAAACTCAAAAGCGCTTAATCTTATCACTCTCCCTTTCCTTGATTCTAACACTTGCCACAGTTGCTTTAGCATGTTACCtcttgagaaaaatgaaaaacgcAGAAGTGATCGAAGCCTGGGAGATGGATATTGGTCCACACAGATTCCCATACAAAGAGCTACACAAGGCCACAAAAGGTTTCAAAGACAAGAACCTCCTCGGGTTCGGTGGGTTCGGTCGCGTGTACAAAGGCGTGCTCCCAAAGTCCCACACCGAAATCGCCGTGAAGCGAATCTCCCACGAATCCAAACAAGGCATGCGAGAGTTTGTCTCGGAAATCTCAACCATCGGAAGGCTCCGACACAGGAACCTCGTACAGTTACTAGGTTGGTGTCGGAGGGAAAACGACCTTCTCCTAGTTTACGATTTCATGCGAAACGGAAGCTTAGACAAGCACCTGTTCGACCAACCGAGGGCAACGTTGACCTGGGAGCAAAGGTTTAAGATAATAAAAGGTGTGGCTTCGGGGTTGGTTTATTTGCACGAGGAGTGGGAACAAACGGTGATTCACAGAGACGTTAAGGCGGGGAACGTTCTGTTAGACGGCGAAATGAACGGGCGTTTGGGCGATTTCGGTTTGGCGAAGCGTTATGAGCACGGCTCGAACCCGAGCACGACGAGGGTGGTGGGAACACTGGGGTATCTTGCGCCGGAGCTCACACGAACGGGGAAACCGACCACGAGTTCCGATGTTTTTGCGTTCGGGGCGTTGATGTTGGAGGTGGCATGTGGGAGGAGGCCGATTGAGCCGAAGGCGTTGCCGGAGGAGTTGGTGCTGGTGGAGTGGGTGTGGGAGCGGTGGCGCGTGGGGAGCGCGTTGGGGGTGGTGGATTCTAAGTTGGGCGGGGTGTTTGATGAGGTGGAGGTGTTGTTGGTGCTGAGGTTGGGGTTGTCGTGTTCCGCGGAGGCGCCGGAGGAGAGGCCCAGCATGAGGCAGGTGCTGAGGTACTTGGAGGGGGAGGCGCCGCCACCGCCGGTGGTGGATGGGAAGAAAGGCGGTGGCGTTGGCGTTGGCGATGGGGAGTTTAAGGATTATGTTCATTCGTATCCGGCGTCGGCGTTTTTTGACAGGGCGAATACGTGGTCGTCGGCCGGTGATGACGTGTCTTCTCTGTCTCTTTCTGGTGGGCGGTAA 1308 0.5367 MYVGFSSSTGLLSSSHYILGWSFKINGEAKTLSLENLPSLSASNKTQKRLILSLSLSLILTLATVALACYLLRKMKNAEVIEAWEMDIGPHRFPYKELHKATKGFKDKNLLGFGGFGRVYKGVLPKSHTEIAVKRISHESKQGMREFVSEISTIGRLRHRNLVQLLGWCRRENDLLLVYDFMRNGSLDKHLFDQPRATLTWEQRFKIIKGVASGLVYLHEEWEQTVIHRDVKAGNVLLDGEMNGRLGDFGLAKRYEHGSNPSTTRVVGTLGYLAPELTRTGKPTTSSDVFAFGALMLEVACGRRPIEPKALPEELVLVEWVWERWRVGSALGVVDSKLGGVFDEVEVLLVLRLGLSCSAEAPEERPSMRQVLRYLEGEAPPPPVVDGKKGGGVGVGDGEFKDYVHSYPASAFFDRANTWSSAGDDVSSLSLSGGR 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1498 435 Gene3D Transferase(Phosphotransferase) domain 1 182 384 - -
Ssu9g1498 435 Gene3D Phosphorylase Kinase; domain 1 90 181 - -
Ssu9g1498 435 SUPERFAMILY Protein kinase-like (PK-like) 86 382 IPR011009 -
Ssu9g1498 435 Gene3D - 1 64 - -
Ssu9g1498 435 Pfam Protein kinase domain 105 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1498 435 SMART serkin_6 105 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1498 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Ssu9g1498 435 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Ssu9g1498 435 Pfam Legume lectin domain 1 37 IPR001220 GO:0030246
Ssu9g1498 435 ProSiteProfiles Protein kinase domain profile. 105 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1498 435 SUPERFAMILY Concanavalin A-like lectins/glucanases 1 127 IPR013320 -
Ssu9g1498 435 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE IV.2-LIKE PROTEIN 1 435 - -
Ssu9g1498 435 PANTHER - 1 435 - -
Ssu9g1498 435 CDD STKc_IRAK 111 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1498 Ssu-Chr9 50734023 50735330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1498 1 406 Receptor kinase-like Gene Family AT3G55550 63.232 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu9g1498 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1498 - - gmx:100787552 651.744