Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu9g1492 | ATGGGTGATGCAATTGATTTGACTGGTGACGGAGGAGTTGTTAAGACCATTGTGAGAAAAAGCAAAGCCAATGCTGTCGGTCCAACAGAAAATTTTCCTCTTGTTGATGTTCATTATGAAGGCACACTTGCTGATACTGGTGAGGTTTTTGACACTACACATGAAGATAACACTGTCTTCTCTTTTGAGCTTGGAAAGGGCAGTGTTATCAAGGCTTGGGAAATTGCAGTGAAAACCATGAAGGTTGGAGAAGTTGCAAAAATAACTTGCAAGCCAGAATATGCATATGGCAGTGCGGGATCTCCTCCAGATATTCCTCCAGATGCAACACTTGTTTTTGAAGTTGAGCTAGTTGCCTGTCGGCCAAGGAAGGGCTCCAGTCTGGGAAGTGTTTCAGAGGAGAGGGCTAGGCTTGAagAGCTGAAGAAGCAGAGAGAGCTAGCTGCTGCTGCCAAAgaggaggaaaagaagaagagagaagaagcAAAAGCAGCAGCTGCTGCACGTGTGCAAGCCAAGTTAGAAGCCAAGAAAGGTCAAGGAAAGGGTAAAGGTAAAGCGAAGTAG | 567 | 0.4303 | MGDAIDLTGDGGVVKTIVRKSKANAVGPTENFPLVDVHYEGTLADTGEVFDTTHEDNTVFSFELGKGSVIKAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACRPRKGSSLGSVSEERARLEELKKQRELAAAAKEEEKKKREEAKAAAAARVQAKLEAKKGQGKGKGKAK | 188 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu9g1492 | 188 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-1 | 1 | 188 | - | - | |
| Ssu9g1492 | 188 | MobiDBLite | consensus disorder prediction | 150 | 188 | - | - | |
| Ssu9g1492 | 188 | MobiDBLite | consensus disorder prediction | 150 | 166 | - | - | |
| Ssu9g1492 | 188 | Coils | Coil | 131 | 170 | - | - | |
| Ssu9g1492 | 188 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 34 | 118 | IPR001179 | GO:0003755 | |
| Ssu9g1492 | 188 | Gene3D | - | 2 | 120 | IPR046357 | GO:0003755 | |
| Ssu9g1492 | 188 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 188 | - | - | |
| Ssu9g1492 | 188 | SUPERFAMILY | FKBP-like | 8 | 124 | - | - | |
| Ssu9g1492 | 188 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 32 | 121 | IPR001179 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu9g1492 | Ssu-Chr9 | 50634542 | 50636653 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ssu9g1492 | 4 | 146 | Calmodulin-binding Proteins | AT5G48570 | 35.811 | 4.23e-13 | 65.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu9g1492 | K01802 | - | gmx:100500018 | 264.618 |