Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1452 ATGAAGAGGGATCACGAAGACAGCTGCGGCGGAGGGGGCGTGAAAGGCGAGTGTTCGTCAATGTCGAACGGGAAGGCGAAGATGTGGGAGGAGGAGCAGCAACAGGGAGGGATGGACGAGTTGCTGGCGGCGTTGGGGTACAAGGTTCGGGCCTCCGACATGGCTGACGTGGCACAGAAGTTGGAGCAGCTGGAGATGGTGATGGGGAGCGCTCCGGAAGAGGGAATTTCGCACCTCGCTTCCGACACCGTTCACTACGACCCTACGGATCTCTATTCCTGGGTCCAAAGCATGCTCACCGAACTCAACCCTTCAcccgacaacaacaacaacaacaacaacatcatccTCGATCCATCTTCCCTCTTAATCCCCGACCCCCTCCTcaacaacaccaccaccaccaccccctCTCGCGTTTTCAACGACGACTCCGAATACGACCTCAGAGCCATTCCCGGCATAGCCGCATACCCCCCTCAAGACACCACCAACAACATCGACGAAATCGAAACCGGCAACAAGCGGTTCAAGCCTTCTCCAGTTGAGTCTCCAGATTCGACTGTGTCAGAGCCCACGCGCCCCGTGGTTCTCAATGACTCGCAGGAAACAGGCGTGCGTCTCGTGCACACTCTCATGGCCTGCGCGGAAGCCGTTCAGCAGGAGAATCCCAAGCTCGCGGACGCGCTCGTCAAGCACGTGGGCATACTCGCGGCGTCGCAAGCCGGCGCCATGAGGAAGGTTGCCTCCTACTTCGCGCAGGCCCTCGCGCATCGAATCTACGGAATCTTCCCCGAAGAAACCCTCGACTCGTCCGTCTCCGACGTGCTTCACATGCACTTCTACGAGTCCTCCCCCTACCTGAAATTCGCGCACTTCACCGCGAACCAGGCGATTCTCGAGGCCTTCGCCACCGCCGGGAGGGTCCACGTCATCGATTTCGGGCTCAAGCAGGGGATGCAGTGGCCCGCGCTCATGCAGGCCCTCGCATTGCGCCCCGGCGGGCCACCGTCTTTCCGGTTGACCGGAATCGGGCCGCCCCAGCCCAACAACACCGACGCGCTCCAGCAAGTCGGCTTGAAGCTGGCCCAGCTGGCCCAAACCATCGGCGTTCAGTTCGAGTTCCGCGGATTCGTTTGCAACAGCTTGGCGGATCTCGACCCGAACATGCTCAAGATCCGACCCGGGGAAGACGTCGCTGTTAACTCCGTTTTCGAGCTCCACCGCATGCTGGCCCGCCCCGGATCTGTCGACAAGGTGTTGGACACGGTCAAGAAAATTAAGCCCAAGATTGTCACCATCGTTGAACAGGAAGCAAACCACAATGGGCCCGTTTTCCTGGACCGGTTCACCGAGGCCTTGCATTATTACTCCAGTCTGTTTGACTCGCTCGAGGGAACTTCCTCTTCGACCGGGTCGGGCTCGCCGAGTCAGGACCTGTTGATGTCCGAGTTGTACCTGGGGAGGCAGATATGCAACGTGGTGGCTTGCGAGGGTGTGGACCGGGTCGAGCGCCACGAGACTTTGGCCCAGTGGAGGGGGAGGATGGGCTCGGCCGGGTTCGAACCGGTTCATCTTGGGTCCAACGCTTTCAAGCAAGCGAGTATGTTGTTGGCTCTATTCGCAGGCGGTGACGGGTATGGGGTGGAGGAGAATAACGGGTGCTTGATGCTCGGGTGGCACACTAGGCCACTCATCACCACCTCCGCGTGGAAGCTTCCCTCGGGCGAGTCGTAG 1737 0.5803 MKRDHEDSCGGGGVKGECSSMSNGKAKMWEEEQQQGGMDELLAALGYKVRASDMADVAQKLEQLEMVMGSAPEEGISHLASDTVHYDPTDLYSWVQSMLTELNPSPDNNNNNNNIILDPSSLLIPDPLLNNTTTTTPSRVFNDDSEYDLRAIPGIAAYPPQDTTNNIDEIETGNKRFKPSPVESPDSTVSEPTRPVVLNDSQETGVRLVHTLMACAEAVQQENPKLADALVKHVGILAASQAGAMRKVASYFAQALAHRIYGIFPEETLDSSVSDVLHMHFYESSPYLKFAHFTANQAILEAFATAGRVHVIDFGLKQGMQWPALMQALALRPGGPPSFRLTGIGPPQPNNTDALQQVGLKLAQLAQTIGVQFEFRGFVCNSLADLDPNMLKIRPGEDVAVNSVFELHRMLARPGSVDKVLDTVKKIKPKIVTIVEQEANHNGPVFLDRFTEALHYYSSLFDSLEGTSSSTGSGSPSQDLLMSELYLGRQICNVVACEGVDRVERHETLAQWRGRMGSAGFEPVHLGSNAFKQASMLLALFAGGDGYGVEENNGCLMLGWHTRPLITTSAWKLPSGES 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1452 578 MobiDBLite consensus disorder prediction 156 194 - -
Ssu9g1452 578 SMART DELLA_2 39 112 - -
Ssu9g1452 578 MobiDBLite consensus disorder prediction 1 32 - -
Ssu9g1452 578 Pfam Transcriptional regulator DELLA protein N terminal 39 106 IPR021914 -
Ssu9g1452 578 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 573 IPR005202 -
Ssu9g1452 578 ProSiteProfiles GRAS family profile. 199 572 IPR005202 -
Ssu9g1452 578 Pfam GRAS domain family 208 572 IPR005202 -
Ssu9g1452 578 PANTHER DELLA PROTEIN GAI1-RELATED 20 573 IPR030006 GO:0003712|GO:0005634
Ssu9g1452 578 Gene3D - 37 102 IPR038088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1452 Ssu-Chr9 49761049 49762785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1452 1 576 GRAS Transcription Factor Family AT2G01570 59.217 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ssu9g1452 GRAS 1e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1452 K14494 - gmx:100799695 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1452 9 49761049 49762785 Ssu6g2891 6 66877975 66879627 PCT