Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1430 ATGAAGCAAAAACGGTTGAGCAAGGTGCAGAGTCCAAATGCATTGGTTATTCACCCTTGCCATTCTGGATCGGATAACAGAAGTGTGAAGATAACGGTTGCAGGTTCAAGTCTCAGTGTTGGTGATGTTAGTCGAATTGGAATGCAAACCGTGGCTGGCGGTGAGGCGGGGAATATTGAAATGGGTGAGGCAGGGAACATGGTTATTTCTATACAAGTGTTGAGGAATGTCACTGACAACTTCAGTGAGAAAAATATACTGGGACAAGGAGGTTTTGGAACGGTTTACAAAGGTGAACTGCATGATGGCACAAAGATTGCGGTGAAAAGAATGGAGTCGGGGGCAATAAGTGGGAAAGGTGCAACAGAATTTAAGTCTGAAATTGCTGTTTTGACCAAGGTTCGCCACCGGCATCTTGTTTCTCTTCTTGGTTACTGCTTGTATGGGAATGAGAAGCTTCTTGTGTATGAGTACATGCCTCAGGGGACATTAAGTAGGCACCTTTTTAACTGGATGGAAGAAGGACTGAAGCCACTGGAGTGGAATAGAAGATTGACCATTGCCTTGGATGTGGCAAGGGCTGTTGAGTACCTTCATAGCTTGGCCCATCAAAGCTTTATTCACAGGGACTTAAAGCCTTCAAACATTCTCCTTGGAGATGATATGAGGGCAAAGGTTTCAGATTTTGGCCTTGTGCGTCTTGCTCCAGAAGGAAAAGCTTCCATAGAAACAAGAATTGCAGGAACTTTTGGATATTTGGCACCAGAATATGCAGTTACTGGTCGTGTGACAACTAAAGTTGATGTGTTCAGCTTTGGGGTAATATTGATGGAGCTGATAACTGGAAGAAGAGCACTTGATGATACCCAACCAGAGGATAGCATGCACCTTGTAACATGGTTCCGTAGAATGTATGTAAATAAAGACTCATTCCACAAAGCCATTGACCACACAATTGAGCTCAATGAGGAAACGCTTGCTAGTATTCACACCGTGGCTGAGTTAGCTGGCCACTGTTGTGCGAGGGAGCCGTATCAAAGGCCTGACGCGGGTCATGCTGTTAATGTGCTTTCTTCTCATGTAGAACTTTGGAAACCATCTGATCAAAGTTCTGAAGATGTATATGGCATTGACCTAGACATGTCTTTACCACAAGCCTTGAAGAAGTGGCAGGCTTATGAGGGTAGAAGCCAAATGgagtcttcttcttcttcacttcTTCTTCCTAGCTTGGATAACACTCAGACAAGCATACCTACGCGTCCATATGGATTTGCTGAGTCTTTCACGTCAGCAGATGGTAGGTGA 1308 0.4381 MKQKRLSKVQSPNALVIHPCHSGSDNRSVKITVAGSSLSVGDVSRIGMQTVAGGEAGNIEMGEAGNMVISIQVLRNVTDNFSEKNILGQGGFGTVYKGELHDGTKIAVKRMESGAISGKGATEFKSEIAVLTKVRHRHLVSLLGYCLYGNEKLLVYEYMPQGTLSRHLFNWMEEGLKPLEWNRRLTIALDVARAVEYLHSLAHQSFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRRALDDTQPEDSMHLVTWFRRMYVNKDSFHKAIDHTIELNEETLASIHTVAELAGHCCAREPYQRPDAGHAVNVLSSHVELWKPSDQSSEDVYGIDLDMSLPQALKKWQAYEGRSQMESSSSSLLLPSLDNTQTSIPTRPYGFAESFTSADGR 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1430 435 ProSiteProfiles Protein kinase domain profile. 81 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1430 435 SUPERFAMILY Protein kinase-like (PK-like) 69 373 IPR011009 -
Ssu9g1430 435 PANTHER RECEPTOR PROTEIN KINASE TMK1 1 435 - -
Ssu9g1430 435 Gene3D Phosphorylase Kinase; domain 1 45 158 - -
Ssu9g1430 435 MobiDBLite consensus disorder prediction 401 435 - -
Ssu9g1430 435 Gene3D Transferase(Phosphotransferase) domain 1 159 378 - -
Ssu9g1430 435 SMART serkin_6 81 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1430 435 Pfam Protein kinase domain 82 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1430 435 PANTHER OSJNBA0070M12.3 PROTEIN 1 435 - -
Ssu9g1430 435 ProSitePatterns Protein kinases ATP-binding region signature. 87 109 IPR017441 GO:0005524
Ssu9g1430 435 MobiDBLite consensus disorder prediction 401 424 - -
Ssu9g1430 435 CDD STKc_IRAK 87 357 - -
Ssu9g1430 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1430 Ssu-Chr9 49318300 49320335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1430 47 344 Trihelix Transcription Factor Family AT1G70460 43.750 1.03e-79 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Ssu9g1430 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1430 - K00924 gmx:100813768 815.839