Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1412 ATGTCACCAATTCCAACAtccttcttcatcatcatcttccTATGCTTTCTCAAcgcttcttcttctatttttgcaaCGCAATTCGACTTTGGAACTTTAACCATGAGCACCCTCAAGCTCCTCGGAGATGCCCACCTCAACAACAACACCGTCAGCCTCACCGGCGACCCCGCCGTCCCCAACTCCGCCGCCGGCAGAGCCCTTTACTCCTCCCCCGTCAGGTTCCGGCAACCGGGCAGCCCTTCTCTGGCGAGCTTCTCcaccttcttctccttctccgtCACCAACCTCAACCCCTCCTCCGTCGGCGGCGGCCTCGCCTTCGTCATCTCGCCGGATGCCTCCACCGTCGGCGACCCCGGCGGCTTCCTCGGCCTGCAatccgccgccgccgccgccgcgtTCCTCGCCGTGGAATTTGACACCCTCATGGACGTGGAATTCAATGACATTAACGGAAACCACGTCGGATTGGACCTAAACAGCGTCGTTTCGACGCAAGTTGGCGACTTAGGAACCCTCGGGGTGGATCTCAAAAGCGGGGACACGGTGAACGCGTGGATCGATTACGACGGAAACGCGAAAGGGTTGCGCATGTGGGTCTCGTACTCGAATGTGAAGCCCAAAGATCCGATTTTGAAGGTGGATCTCGATGTGGGTATGTACGTTAGTGATTTCATGTATGTGGGGTTTTCTGGGTCTACCCAAGGTAGCACCGAGGTGCACCGTGTGGAGTGGTGGAGTTTCAACTCCTCTTTTGATTCCACGGCGGCTCCTGCCGCCACGTCAGCACCCCCCGCCACGTCAGCACCTGAGCAAAAGGAGAGCAAGTCTTCTAAGAAGGGTACTGTGGGGGCAGTTGCTGGGGTTGTCACTGCTAGTGCTTTTGTTCTTGCTCTCTTTGCTGGGGCATTGATTTGGATGTATTCTAAGAAGGTGAAGCGTGTGAAGAGGTTAGATCATTCTATTGAAACTGAGATTATTAGAATGCCTAAAGAGTTTAGCTACAAGGAGCTGAAGTTGGCCACTAGGGGGTTCAGTGCTAATAAGGTCATTGGTCATGGTGCTTTTGGGACTGTTTACAAGGGTGTGTTGCCTGAGAGTGGTGACATTGTTGCGGTGAAGAGGTGTAACCATAGTGGTCAGGGGAAGAATGAGTTTTTGTCTGAGTTGTCCATAATTGGGAGTCTTAGGCATCGGAATTTGGTTCACCTTCAAGGTTGGTGCCATGAGAAAGGTGAGATTTTGCTGGTGTATGACTTGATGTCCAATGGGAGTCTAGATAAGGCTTTGTATGAGGCCAGGGTGCCTTTGTCATGGCCTCACAGGctcaaaattttgttaggtGTGTCGTCTGTTTTGGCCTACTTGCATCACGAGTGCGAAAACCAGGTAATTCATAGGGACATTAAGACTAGTAACATTATGTTGGATGAAGGGTTCAATGCCCGGTTGGGCGATTTCGGTTTGGCGAGGCAGACGGAGCATGACAAGTCTCCTGATGCCACCGTGGCTGCTGGGACAATGGGGTACCTCGCGCCTGAGTATGTGCTTACCGGTAGAGCGACGGAGAAAACTGATGTGTTTAGCTATGGTGCTGTGGTTCTTGAGGTGGCCAGTGGGAGGAGGCCTATTGAGAAAGATGCTGGTCGGAATGGTGAAGTTGGGGTTAGCAGCAATTTGGTGGAATGGGTTTGGGCTTTGCATCAAGAAGGTAAGTTGCTAACGGCGGCTGATCCGAGGCTTGAAGGCGAGTTTGAGGAAGGGGAGATGGGGAGGGTACTCTTGGTTGGATTAGCTTGTTCACATCCTGATTCAATGGCAAGACCTACCATGAGGGGTGTGGTTCAGATGCTGCTGGGTGAGGCTGAAGTGCCTATTGTCCCTAGAGTCAAGCCATCTACTAGTTACAGTACTTCTCACCTCTTGATGAGCTTGCAAGATAGTGAATCTGACTGTAATAATGCTATGATCACCATCTCTACCTCTTCTTCAGAGAACAGCTTCAATGGCAGAGATATAGTCTGA 2028 0.4911 MSPIPTSFFIIIFLCFLNASSSIFATQFDFGTLTMSTLKLLGDAHLNNNTVSLTGDPAVPNSAAGRALYSSPVRFRQPGSPSLASFSTFFSFSVTNLNPSSVGGGLAFVISPDASTVGDPGGFLGLQSAAAAAAFLAVEFDTLMDVEFNDINGNHVGLDLNSVVSTQVGDLGTLGVDLKSGDTVNAWIDYDGNAKGLRMWVSYSNVKPKDPILKVDLDVGMYVSDFMYVGFSGSTQGSTEVHRVEWWSFNSSFDSTAAPAATSAPPATSAPEQKESKSSKKGTVGAVAGVVTASAFVLALFAGALIWMYSKKVKRVKRLDHSIETEIIRMPKEFSYKELKLATRGFSANKVIGHGAFGTVYKGVLPESGDIVAVKRCNHSGQGKNEFLSELSIIGSLRHRNLVHLQGWCHEKGEILLVYDLMSNGSLDKALYEARVPLSWPHRLKILLGVSSVLAYLHHECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYVLTGRATEKTDVFSYGAVVLEVASGRRPIEKDAGRNGEVGVSSNLVEWVWALHQEGKLLTAADPRLEGEFEEGEMGRVLLVGLACSHPDSMARPTMRGVVQMLLGEAEVPIVPRVKPSTSYSTSHLLMSLQDSESDCNNAMITISTSSSENSFNGRDIV 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1412 675 ProSiteProfiles Protein kinase domain profile. 346 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1412 675 Gene3D Phosphorylase Kinase; domain 1 307 421 - -
Ssu9g1412 675 ProSitePatterns Legume lectins beta-chain signature. 136 142 IPR019825 -
Ssu9g1412 675 MobiDBLite consensus disorder prediction 258 273 - -
Ssu9g1412 675 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 13 668 - -
Ssu9g1412 675 SMART serkin_6 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1412 675 SUPERFAMILY Protein kinase-like (PK-like) 329 656 IPR011009 -
Ssu9g1412 675 MobiDBLite consensus disorder prediction 258 281 - -
Ssu9g1412 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Ssu9g1412 675 Gene3D - 24 265 - -
Ssu9g1412 675 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Ssu9g1412 675 CDD STKc_IRAK 352 619 - -
Ssu9g1412 675 Gene3D Transferase(Phosphotransferase) domain 1 422 625 - -
Ssu9g1412 675 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 255 IPR013320 -
Ssu9g1412 675 Pfam Protein kinase domain 348 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu9g1412 675 CDD lectin_legume_LecRK_Arcelin_ConA 26 253 IPR001220 GO:0030246
Ssu9g1412 675 Pfam Legume lectin domain 26 257 IPR001220 GO:0030246
Ssu9g1412 675 PANTHER - 13 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1412 Ssu-Chr9 49017373 49019400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1412 7 658 Receptor kinase-like Gene Family AT3G53380 65.167 0.0 866
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu9g1412 Pkinase 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1412 - - gmx:100815895 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1412 9 49017373 49019400 Ssu6g2835 6 65726438 65729424 PCT