Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1363 ATGTCAAACCGAGTTTGCATAAAAAAAGGGTTGTTGACACTAATGGGTGTGAGGTTTGTGGGCAAACACGAACACCCAACACGTTTTTTCATGTGTGTTCGTTCCAAAACGTCATCTGCTCAGTATGTAGCATCGAGATTTCGAGACCCCACTTTTGAGAAACTCATGGACAACTACAAGAACCTTGTCAAAGTCAGTGCCATTCAAGACCTCATCCTTGCAAACCCAAAGAACCCATCAGTCTCCATTGATTTCCTCTCCAAGCTCTCCCAGAAGCTCCACCTAAACCGCGGTGCCACTGCCTTCCTACGCAAGTTTCCTCACATCTTCCATATTTACTATGACccttccaagttgaagcccttTTGCAGGTTAACTGATGCTGCTCTTGATGTTTCGCGGCAGGAAGCAGTGGCCATTAATGCTTCTTTGCCTGTTGTTGTTGAAAGACTTTTTCGGATACTGTCCATGTCTGCATCCAGAATGGTTCCTCTTAGAGCTGTTTTTAAGGTTTGGAAGGAGCTTGGGCTGCCTGATGATTTTGAGAACTCGGTTATATCTGCTAATTCTGGTGTTTTTCAGCTGCGTGATGCGCATGAACCAAATACTCATTTGTTGAAGCTGGTTGATGGTGTTTGCAGCAATGGTTTTAGGGCAGCTGTTGAGGATTGGAGGGTTGTTGAGTGCTGCAAGGAGGACTGCAGTGTTGATAGGATGGAAATGCAGTTCAGTTTCAAACACGGGTATCCTCCGGGTATGAGGTTGAGCAAGAATTTCAAGGCCAAGGTGAAGGAATGGCAGAGGTTGCCATATGTGGGGCCTTATGAAATGGTGAGTGAGAAGAAAAAGTCTAAGGCTGGAATAATGGCTATGGAGAAGCGAGCAGTGTCGATTGTTCATGAGTTCCTGAGTTTGACGGTGGAGAAGATGGTGGAAGTTGAGAAGATCAGCCAGTTTAGAAAATGGTTTGGGATTGATTTAAATGTAAGGGATCTGTTCCTGGACCACCCAGGGATCTTCTATTTGTCAACTAAGGGTAAAAGGCATACTGTTTTCCTCAGGGAAGCTTATGAACGAGGGTGTTTGATAGAACCAAATCCTGTCTATGATGCAAGAAGAAGGCTACTTGATCTTGTTGTTTTAGGACGTCGGGGTCTGCCAGCTGCTAATTCAAAGTTGCAGGATAGAAGCAGCTGCAATGAGGTTGGACAAGAGGAAAACCAGCAAAGACATGACTTGTTACCATCTTGA 1251 0.442 MSNRVCIKKGLLTLMGVRFVGKHEHPTRFFMCVRSKTSSAQYVASRFRDPTFEKLMDNYKNLVKVSAIQDLILANPKNPSVSIDFLSKLSQKLHLNRGATAFLRKFPHIFHIYYDPSKLKPFCRLTDAALDVSRQEAVAINASLPVVVERLFRILSMSASRMVPLRAVFKVWKELGLPDDFENSVISANSGVFQLRDAHEPNTHLLKLVDGVCSNGFRAAVEDWRVVECCKEDCSVDRMEMQFSFKHGYPPGMRLSKNFKAKVKEWQRLPYVGPYEMVSEKKKSKAGIMAMEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFGIDLNVRDLFLDHPGIFYLSTKGKRHTVFLREAYERGCLIEPNPVYDARRRLLDLVVLGRRGLPAANSKLQDRSSCNEVGQEENQQRHDLLPS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1363 416 Pfam Plant organelle RNA recognition domain 48 383 IPR021099 GO:0003723
Ssu9g1363 416 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 23 410 IPR045040 GO:0003723
Ssu9g1363 416 MobiDBLite consensus disorder prediction 392 416 - -
Ssu9g1363 416 PANTHER OS04G0618900 PROTEIN 23 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1363 Ssu-Chr9 48112080 48113330 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1363 - - gmx:100808404 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1363 9 48112080 48113330 Ssu7g1752 7 35904003 35905069 PCT