Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1357 ATGCTGAGGATTCAGATTATCAGTATTCGAATTGATGAGGAATCAGATACTGAGACAAAAAAGAATGTTCATGTGGGTTTACAACAGCTTAACAGATGGAAAACCATAGCAACTGTTGACGGAATAAAGAAAAGGTTCAACTACAACATGATACTCGAGGACCTCATGGATGAATGCCGTTGTAATGGTCGTGTCATCATGGACGCTGAGTTTGGCAAGGTCATACAACTTAACGGACATCAAAGAAGGAATGTATGTCATTTCCTTGTGCAGGAAGGCATAGTAAAGAAGAAACATCTCAAAATCCATGGTTTCTAA 318 0.3899 MLRIQIISIRIDEESDTETKKNVHVGLQQLNRWKTIATVDGIKKRFNYNMILEDLMDECRCNGRVIMDAEFGKVIQLNGHQRRNVCHFLVQEGIVKKKHLKIHGF 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1357 105 PANTHER PROTEIN TRANSLATION FACTOR SUI1-LIKE PROTEIN 13 105 - -
Ssu9g1357 105 CDD eIF1_SUI1 23 104 IPR005874 GO:0003743
Ssu9g1357 105 Pfam Translation initiation factor SUI1 20 94 IPR001950 GO:0003743|GO:0006413
Ssu9g1357 105 ProSiteProfiles Translation initiation factor SUI1 family profile. 23 93 IPR001950 GO:0003743|GO:0006413
Ssu9g1357 105 SUPERFAMILY eIF1-like 17 105 IPR036877 GO:0003743|GO:0006413
Ssu9g1357 105 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 13 105 - -
Ssu9g1357 105 Gene3D - 8 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1357 Ssu-Chr9 48061738 48062604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1357 13 105 Eukaryotic Initiation Factors Gene Family AT1G54290 53.763 1.03e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1357 K03113 - dcr:108193981 113.62