Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1340 ATGATGCTCCAATTTGATTCCCAGTTTTTCATGTCCATTGTGTTTCTTGGTTTTGTTGGGCTGTTGTGTCGTTTGTACACTACCTTGGTGGAGAAGCCAAATAGGCTTCGCTCTAAGCTAATGAAGCAAGGTATCAGTGGTCCACCTCCAACTATGCTGCTTGGAAATATTGTGGACATAAAGAAAGCTCGTTCTACCACTGCAAATTCTCCTTCTTTTGAACCCCCCGCCTCTCACAACTGTGCTTCTGTTCTCCTTCCATTGTTTGATAAATGGAGGGAACAGTATGCAGGTCAAGTCTTCATGTTTTCTCTTGGAAACAGACAAATTCTGTGTGTGAGCCAACCTGACATAGTAAGAGATATCACCACATGCACATCCTTGGACTTGGGGAAGCCTTCATATCAACAGAAACAACTAGGGCCATTGCTGGGTCGCGGCATTTTAACTTCAAATGAGACTACATGGGTCCATCAAAGAAAGATCCTAGCTCCAGAACTATACATGGAAAAGGTTAAGGTATACAAGGTTTTCAGCTTGCTTGTGAGTCTGCTACAATCTCTGCTAAACTTGTGGAGTAGTAGAGCAGAAGCAGAAGGTGGAGTTGCTGACATAAAAATTGATGAGTACATGAGGAATTTCTCTGGGAATGTTATTTCAAGAGCATGCTTTGGAAGCAATTATTCCAAGGGGGAAGAAATTTTCTTGAAACTCAGAGCTCTCCAAGAGGTCATGTCCTGGAAAAATGTATCCATAGGGGTCCCTGGCATGAGATTCCTTCCAACAAAGACCAATAGAGAAGCATGGACATTAGAAAAGGAGGTGAAAAAATTGCTACTCCAGGGGGtgaaggaaagaaaggaaaCTACTTCTGAGAAGGACTTGCTGCAAATGGTTCTTGAAGGAGCTAAGAATAGTAATCTCAGTGAAGAGGCCACGGACCGTTTTATTGTTGATAACTGCAAGAATATATACTTGGCAGGCTATGAGACAACTGCAGTTGCTGCTACATGGTGCCTTATGTTGTTGGCCTCAAATCAAAATTGGCATGATCGTGTTCGTGCTGAGGTGCTAGAAATTTGCAGGGGTAGAATCCCAGATTTTAATATGCTTTGTAAAATGAAGCAGCTGACAATGGTTATTCATGAATCATTGCGCCTTTATCCCCCGGTAGCTGTGGTGTCAAGGCAAGCCTTCAAGGACATGAAATTTGGTAACATTGATGTCCCAAAGGGCTTAAACCTTTGGATAATGGTAGTAACTTTGCATACAAATCCAGATATCTGGGGAGCTGATGCCCACAAATTCAACCCAGAAAGATTTGCCAATGGAACCATAGGTGCTTGTAAGTTTCCACACATGTACATGCCCTTTGGGGTTGGCCCGCGAGTGTGTCTTGGACAGAACTTGGCTATGGTTGAACTTAAGATGCTGATAGCTCTCATCTTGTCCAAATTCTCCTGCTCCGTCTCTCCGCAATACGTTCATTCACCTACTCTTAGGTTGCTCATAGAGCCTGAGCATGGAGTCCATCTCTTGGTGAAAAAACTATGA 1554 0.4279 MMLQFDSQFFMSIVFLGFVGLLCRLYTTLVEKPNRLRSKLMKQGISGPPPTMLLGNIVDIKKARSTTANSPSFEPPASHNCASVLLPLFDKWREQYAGQVFMFSLGNRQILCVSQPDIVRDITTCTSLDLGKPSYQQKQLGPLLGRGILTSNETTWVHQRKILAPELYMEKVKVYKVFSLLVSLLQSLLNLWSSRAEAEGGVADIKIDEYMRNFSGNVISRACFGSNYSKGEEIFLKLRALQEVMSWKNVSIGVPGMRFLPTKTNREAWTLEKEVKKLLLQGVKERKETTSEKDLLQMVLEGAKNSNLSEEATDRFIVDNCKNIYLAGYETTAVAATWCLMLLASNQNWHDRVRAEVLEICRGRIPDFNMLCKMKQLTMVIHESLRLYPPVAVVSRQAFKDMKFGNIDVPKGLNLWIMVVTLHTNPDIWGADAHKFNPERFANGTIGACKFPHMYMPFGVGPRVCLGQNLAMVELKMLIALILSKFSCSVSPQYVHSPTLRLLIEPEHGVHLLVKKL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1340 517 Pfam Cytochrome P450 89 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1340 517 PANTHER CYTOCHROME P450 714C2 12 511 - -
Ssu9g1340 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Ssu9g1340 517 SUPERFAMILY Cytochrome P450 83 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1340 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 511 - -
Ssu9g1340 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1340 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1340 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1340 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1340 517 Gene3D Cytochrome P450 33 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1340 517 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1340 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1340 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1340 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1340 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1340 517 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1340 Ssu-Chr9 47900516 47903546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1340 118 514 Cytochrome P450 AT5G24900 43.276 9.23e-121 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1340 K24544 - gmx:100785420 933.324