Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1316 ATGGCAGAGGCCAATGTAGTTCTGTTGGATTTCTTGCCAAGCTCTTATGGAATGAGAGTGAAAATCGCTTTGGCAGAGAAGGGTATCTCATATGAGTGCAAGCAAGAAGACTTTCAAGCTAAAAGTTCTCTGCTTCTAGAGATGAACCCGGTTCACAAAATGATACCAGTTTTGATTCATAATGGGAAACCCATCTGTGAATCACTCAACATTGTTTGGTACATTGATGAGGCATGGAACCACAAACCTTCTCTGCTTCCCTCTGACCCTTACAAACGATCCCAAGCCAGGTTTTGGGGCGATTACATTGACAAAAATGTATACAATGCTGTAAAGAGGTTATGGACGGGGAAGGGTAAAGAACAAGAAGAGTGCAAGAAACAATTTATAGAATGCTTGAAGACCCTGGAAGATGAACTTGGAGACAAGGCATATTTTGGTGGTGAGGACTTTGGGTATTTGGATGTGGCTCTTGTTCCCTTCACTGGATGGCTTTACACGGTTGAGACCTGCGGGAAACTAAGCATTGAGGAAGAGTGTCCCAAAGTTGTGGCTTGGGCCGAGAGGAGGACGGTTTTCCTTTCCGTGATGTTGGCCGCTATCAGAGATTATTTGCGAGAAACAGGGAAGGCAGCGAAACGTCCTCGCACCACACTTGCCAATTCCATTCGATCCTTGTAA 681 0.4493 MAEANVVLLDFLPSSYGMRVKIALAEKGISYECKQEDFQAKSSLLLEMNPVHKMIPVLIHNGKPICESLNIVWYIDEAWNHKPSLLPSDPYKRSQARFWGDYIDKNVYNAVKRLWTGKGKEQEECKKQFIECLKTLEDELGDKAYFGGEDFGYLDVALVPFTGWLYTVETCGKLSIEEECPKVVAWAERRTVFLSVMLAAIRDYLRETGKAAKRPRTTLANSIRSL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1316 226 Gene3D Glutaredoxin 1 88 - -
Ssu9g1316 226 SFLD Main.3: Omega- and Tau-like 2 191 IPR045073 -
Ssu9g1316 226 CDD GST_C_Tau 90 210 IPR045074 GO:0004364|GO:0006749
Ssu9g1316 226 SFLD Glutathione Transferase (cytosolic) 2 191 IPR040079 -
Ssu9g1316 226 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Ssu9g1316 226 CDD GST_N_Tau 6 79 - -
Ssu9g1316 226 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Ssu9g1316 226 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 190 - -
Ssu9g1316 226 SUPERFAMILY GST C-terminal domain-like 77 190 IPR036282 -
Ssu9g1316 226 Pfam Glutathione S-transferase, C-terminal domain 123 189 - -
Ssu9g1316 226 Gene3D - 89 212 - -
Ssu9g1316 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Ssu9g1316 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 219 IPR010987 -
Ssu9g1316 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 190 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1316 Ssu-Chr9 47478512 47482572 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1316 6 189 Glutathione S-transferase Gene Family AT1G78380 59.239 3.49e-82 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1316 K00799 - gmx:100527221 350.903