Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1312 ATGTTTTTCGTCTACAACAAATGCAAAAATGGTGGCCTTGTCAATGTCAGGAATGCCGCTCAGCATTATGGTGGTAATGTGATTagaaaactgatttttaataaaaggtaCTTTGGAAAGGGCAGGGAAGACGGAGGGGCTGGTTTAGAGGAAGTAGAGCATGTAGATGCCATTTTTACTTTGCTTAAGCACATTTATGCCTTTTATGTTTCTGATTATATCCCATTTTTGAGGATGTTTGATTTGGATGGCCATAAGGGCAAGATGAAGAATGCTATGAGGATCATGAAGAAGTATCATGATTCCATCATTGTAGAAAGAATCAAGCAATGGAATGACGAATTGAAGACTGTTGAAGAGGACTTGCTGGATGTTATGATCTCACTCATGGACGTCAATAATAATTCATTGTTGACAGCGAAGGAAATCAAGGCGCAAATTATAGAATTGATGATTGAAGTGGTGGACAATCCAGCAAATGCAACTGAATGGGCACTGGCAGAAATGATAAATCAGCCCGAATTGCTTCAACGAGCCAAGGAAGAATTGGACAATGTGGTAGGTGGAAAGAGACTAGTCCAAGAATCAGATATTCCTAAACTCAACTTTGTGAAGGCTTGTGCAAAAGAAACTTTTCGCCTTCATCCCATTGTGCCTTTCACCGTTCCCCATGTTTGTATGAAGGACACAGCGGTTGCCAATTACTCGATCCCAAAGGGTAGTCATATACTACTAAGCAGAAGGGGTCTTGGGAGAAACCCAAAAGTGTGGAATGAACCCCTCAAGTTCAAGCCAGAACGCCACCTCAAGAGTGATGGGTCTGATGTAGTTTTGACAGAACCAGATTTAAGGTTGATATCATTCAGCACGGGAAGGCGTGGTTGTCCTGGAATAATGCTTGGCACCACAATGACTGTAATGCTATTGGCTAGGTTGCTCCATGGCTTCACTTGGAGTGCACCTCCTAATGTGTCAAGCATCAATCTTGCCGAGTCCAAAGGGAATTTGTTTCTTGCTGAGCCACTTGTGGCACTTGCAAAGCCAAGATTATCAGCAGAATTGTATTACCTTTAA 1074 0.4153 MFFVYNKCKNGGLVNVRNAAQHYGGNVIRKLIFNKRYFGKGREDGGAGLEEVEHVDAIFTLLKHIYAFYVSDYIPFLRMFDLDGHKGKMKNAMRIMKKYHDSIIVERIKQWNDELKTVEEDLLDVMISLMDVNNNSLLTAKEIKAQIIELMIEVVDNPANATEWALAEMINQPELLQRAKEELDNVVGGKRLVQESDIPKLNFVKACAKETFRLHPIVPFTVPHVCMKDTAVANYSIPKGSHILLSRRGLGRNPKVWNEPLKFKPERHLKSDGSDVVLTEPDLRLISFSTGRRGCPGIMLGTTMTVMLLARLLHGFTWSAPPNVSSINLAESKGNLFLAEPLVALAKPRLSAELYYL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1312 357 SUPERFAMILY Cytochrome P450 8 349 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1312 357 Gene3D Cytochrome P450 3 338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1312 357 Pfam Cytochrome P450 10 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1312 357 PRINTS E-class P450 group I signature 162 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1312 357 PRINTS E-class P450 group I signature 246 270 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1312 357 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1312 357 PRINTS E-class P450 group I signature 23 41 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1312 357 PRINTS E-class P450 group I signature 285 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1312 357 PRINTS E-class P450 group I signature 295 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1312 357 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 1 355 - -
Ssu9g1312 357 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 288 297 IPR017972 GO:0005506|GO:0016705
Ssu9g1312 357 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 355 - -
Ssu9g1312 357 ProSiteProfiles EF-hand calcium-binding domain profile. 118 153 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1312 Ssu-Chr9 47420534 47424572 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1312 3 355 Cytochrome P450 AT4G39950 55.932 6.63e-139 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1312 - K14984 gmx:100809902 545.814