Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1311 ATGACAAACAATAGCTCACTACAACAAAAAATTTCGGTTTTAGAGAAGAAGAGGACTTGCAATATTGGGCCTAAAAGTAAGAGGTTGCATATTGACAATGAAGATGCTATGGAATTGAATCTTACATGGGAAGAAACACAAGATTTGCTTCGTCCTTCTCCTAGTGTCAAGCCAAGCGTTGTTACAATTGAGGACCAAGTATCTGAAGAATACGATAATTTGGCATTAGATCTCAATTATTCTCCACAAGAGCAATGGGGAAGGAACAATGGGCTCAATGTGATGATTGCTCTAAATGGCGAAAGCTGCCTGTTAATGCTTTTCTTCCTTCCAACTAGACATGTTCTGAAAATGTTTGGGATTGAAGTGTTCATGTTCTGCACCAGAGTAGCTAAGTTCAAGGGAATTAGAAAATCTTCTGAAAACAAACAAAGGTGTGATCCTGATATCTATGTTTAG 459 0.3791 MTNNSSLQQKISVLEKKRTCNIGPKSKRLHIDNEDAMELNLTWEETQDLLRPSPSVKPSVVTIEDQVSEEYDNLALDLNYSPQEQWGRNNGLNVMIALNGESCLLMLFFLPTRHVLKMFGIEVFMFCTRVAKFKGIRKSSENKQRCDPDIYV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1311 152 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 10 73 - -
Ssu9g1311 152 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 10 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1311 Ssu-Chr9 47387412 47389852 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1311 16 86 B3 DNA Binding Superfamily AT4G32010 50.633 1.06e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1311 - - gmx:100789147 122.864