Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1309 ATGTTTAAAGGGATGTACAGGAATGCCGCTCAGCATTATGGTGGTAATGTGATTagaaaactgatttttaataaaaggtaCTTTGGAAAGGGCAGGGAAGACGGAGGGGCTGGTTTAGAGGAAGTAGAGCATGTAGATGCCATTTTTACTTTGCTTAAGCACATTTATGCCTTTTATGTTTCTGATTATATCCCATTTTTGAGGATGTTTGATTTGGATGGCCATAAGGGCAAGGTGAAGAATGCTATGAGGATCATGAAGAAGTATCATGATTCCATCATTGAAGACAGAATCAAGCAATGGAATGACGGATTGAAGGCTGTTGAAGAGGACTTGCTGGATGTTATGATCTCACTCAAGGACGTCAATAATAATTCATTGTTGACAGTGAAGGAAATCAAGGCACAAATTATAGAATTGATGATTGAAGTGGTGGACAATCCAGCAAATGCAACTGAATGGGCACTGGCAGAAATGATAAATCAGCCCGAATTGCTTCAACGAGCCAAGGAAGAATTGGACAATGTGGTAGGTGGAAAGAGACTAGTCCAAGAATCAGATATTCCTAAACTCAACTTTGTGAAGGCTTGTGCAAAAGAAACTTTTCGCCTTCATCCCATTGTGCCTTTCACCGTTCCCCATGTTTGTATGAAGGACACAGCGGTTGCCAATTACTCGATCCCAAAGGGTAGTCATATACTACTAAGCAGAAGGGGTCTTGGGAGAAACCCAAAAGTGTGGAATGAACCCCTCAAGTTCAAGCCAGAACGCCACCTCAAGAGTGATGGGTCTGATGTAGTTTTGACAGAACCAGATTTAAGGTTGATATCATTCAGCACGGGAAGGCGTGGTTGTCCTGGAATAATGCTTGGCACCACAATGACTGTAATGCTATTGGCTAGGTTGCTCCATGGCTTCACTTGGAGTGCACCTCCTAATGTGTCAAGCATCAATCTTGCCGAGTCCAAAGGGAATTTGTTTCTTGCTGAGCCACTTGTGGCACTTGCAAAGCCAAGATTAGCAGCAGAATTGTACCACCTTTAA 1044 0.4205 MFKGMYRNAAQHYGGNVIRKLIFNKRYFGKGREDGGAGLEEVEHVDAIFTLLKHIYAFYVSDYIPFLRMFDLDGHKGKVKNAMRIMKKYHDSIIEDRIKQWNDGLKAVEEDLLDVMISLKDVNNNSLLTVKEIKAQIIELMIEVVDNPANATEWALAEMINQPELLQRAKEELDNVVGGKRLVQESDIPKLNFVKACAKETFRLHPIVPFTVPHVCMKDTAVANYSIPKGSHILLSRRGLGRNPKVWNEPLKFKPERHLKSDGSDVVLTEPDLRLISFSTGRRGCPGIMLGTTMTVMLLARLLHGFTWSAPPNVSSINLAESKGNLFLAEPLVALAKPRLAAELYHL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1309 347 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 278 287 IPR017972 GO:0005506|GO:0016705
Ssu9g1309 347 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 7 345 - -
Ssu9g1309 347 PRINTS E-class P450 group I signature 152 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1309 347 PRINTS E-class P450 group I signature 236 260 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1309 347 PRINTS E-class P450 group I signature 13 31 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1309 347 PRINTS E-class P450 group I signature 285 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1309 347 PRINTS E-class P450 group I signature 275 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1309 347 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1309 347 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 345 - -
Ssu9g1309 347 Gene3D Cytochrome P450 6 344 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1309 347 SUPERFAMILY Cytochrome P450 9 339 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1309 347 Pfam Cytochrome P450 11 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1309 Ssu-Chr9 47376255 47383183 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1309 7 345 Cytochrome P450 AT5G05260 55.588 1.86e-140 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1309 - K14984 gmx:100809902 530.02