Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1308 ATGTTCAGCAAGAGTGCTGCAAGGCATTATTGTGGTAACCTGATCAGGAAAATAGTTTTCAATACCAGGTATTTTGGGAAGGGTAGGAAGGATGGAGGGCCTAGTTTTGAGGAAGTAGAACATGTTGACTCCCTCTTCTATTTGCTCAAGTACGTTTTTGCCTTTTCTGTTTCTGATTATATGCCATGCTTGAGGGGACTTGACTTAGATGGCCACCAGAAAAAGGTGAAGGAAGCTTTGAGGATCATCAAGAAGTATCATGATCCCATCGTTCGAGAGAGAATTAAACAATGGAACGAAGGATCAAAGGTTGATGAAGAGGACTGGCTTGATGTTCTGATCTCCCTGAAGGATGCCAACAATAACCCATCACTGACATTGGAGGAAATCAATGCACAAATTATAGAATTGATGATTGCAACAGTGGACAATCCATCGAATGCTTTTGAATGGGCACTTGCTGAAATGATAAACCAACCTAAGATGCTCCAACGAGCCACTAAAGAATTGGACAGTGTAGTAGGAAAAGAGAGGCTGGTCCAAGAATCAGATATACCTAAGCTCAACTATGTGAAGGCTTGTGCAAGAGAAGCTTTTCGCCTTCATCCCATTGCACCTTTCGTTCCTCCCCATGTCTCTATGAGTGACACAAAGGTGGGAAATTACTTCATCCCAAAGGGTAGCCATGTAATGCTAAGCAGACAAGAGCTTGGGAGAAACCCAAAAGTGTGGAATGAACCCCATAAGTTCAAACCGGAACGCCACCTCAAGAATGATGGGTCTGATGTTGTTTTGACCGAGCCAAATTTGAAGTTCATATCATTTAGCACAGGAAGGCGTGGTTGTCCCGGAGTGATGCTTGGCACCACAATGACCGTGATGCTATTTGCTAGATTGCTCCATGGCTTCACTTGGAGTGCACCACCCAATGTTTCAACGATCAACCTTGCTGAGTCCAACGATGATATCCTTCTTGCACAGCCACTTGTCGCACTTGCCAAGCCAAGATTAGCACCAGAGCTATATTGCCTTTAA 1035 0.4406 MFSKSAARHYCGNLIRKIVFNTRYFGKGRKDGGPSFEEVEHVDSLFYLLKYVFAFSVSDYMPCLRGLDLDGHQKKVKEALRIIKKYHDPIVRERIKQWNEGSKVDEEDWLDVLISLKDANNNPSLTLEEINAQIIELMIATVDNPSNAFEWALAEMINQPKMLQRATKELDSVVGKERLVQESDIPKLNYVKACAREAFRLHPIAPFVPPHVSMSDTKVGNYFIPKGSHVMLSRQELGRNPKVWNEPHKFKPERHLKNDGSDVVLTEPNLKFISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWSAPPNVSTINLAESNDDILLAQPLVALAKPRLAPELYCL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1308 344 SUPERFAMILY Cytochrome P450 7 336 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1308 344 Pfam Cytochrome P450 10 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1308 344 Gene3D Cytochrome P450 3 338 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1308 344 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 5 342 - -
Ssu9g1308 344 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 275 284 IPR017972 GO:0005506|GO:0016705
Ssu9g1308 344 PRINTS E-class P450 group I signature 10 28 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1308 344 PRINTS E-class P450 group I signature 129 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1308 344 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1308 344 PRINTS E-class P450 group I signature 282 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1308 344 PRINTS E-class P450 group I signature 233 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1308 344 PRINTS E-class P450 group I signature 272 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1308 344 PRINTS E-class P450 group I signature 149 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu9g1308 344 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1308 Ssu-Chr9 47332996 47335287 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1308 6 342 Cytochrome P450 AT5G05260 57.101 1.88e-144 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1308 - K14984 gmx:100785254 629.402