Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1305 ATGACCACACAGGCGCAAGATCCGCCTTCAAACCCTAACCCTAATCCCAATGCCACGTCGCCAGCGCCATCGTCCGCCTTGTTCATGCGCGGTGGCGGCGTTAACGGCCCTTCCGCCGCTCCCGTCGCCGGCTCCGGCGAGTCGCACGCGCACCACCGTCGGTCGCACTCGGAGGTGAGTTGCCGGCTGCCGGACGACATGATGGACCTGTCGCCGTCGGATCCGTTCAACGGCGGATCCTCGACGGCGAGCCTGGAGGAGATCGGATCCGAGGACGACCTGTTCTCCACCTACATTGACGTCGAGAAGCTCGGCGATGGCGCTAACGGCGTCGGCCGCGGCGGAAACGGATCTGATCAGGGCGGTTACGGGAACGGCGCCGGCACGAGCGGCCACAACGACGGCGAGAAGAGTCCGAGCGCCGCCGCGGCGACGAGGCCGAGACACCGGCACAGTAGCTCCGTCGACGGTTCCACGTCGACTAGCATGTTCGGAGAGATCATGGAGGCGAAGAAGGCCATGCCTCCTGATAAGCTCGCGGAGCTTTGGAACATTGATCCAAAGCGTGCCAAgagAATACTGGCTAATCGGCAATCTGCTGCGCgctcaaaagaaagaaaggcacGCTATATACAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACCGAAGCCACAACACTCTCTGCCCAACTGACATTGTACCAGAGGGATACAACTGGTCTGAGTACTGAAAATACTGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAACAGGCACAGCTTCGTGATGCTCTTAATGATGCATTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACTGGCGAGGCATTGAACCCTTCTGAGTCTTTCAATCTGGGAATGCCCCAGATGCCATTTGCAGGgtcaaatttcttttcaatcccACTACATTCAGGTCCTGCTGGTCACCAGAACATGCAGTTACCTCCATTTGGTCACTCCCCATCTGGCGTGCCAACTTATCAGCTGCAACAAACAAATTCTCACCAAATCTCAGATATATTGCAAAATGACCAGCTTGGTCGTTTGCAGGGACTTGACATTAGTAGCAAAGGAACACCCGTTGTGAAGTCTGAAGGCCCCTCAATATCTGCAAATGAGAGTAGCACTACATTTTGA 1161 0.5392 MTTQAQDPPSNPNPNPNATSPAPSSALFMRGGGVNGPSAAPVAGSGESHAHHRRSHSEVSCRLPDDMMDLSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVEKLGDGANGVGRGGNGSDQGGYGNGAGTSGHNDGEKSPSAAAATRPRHRHSSSVDGSTSTSMFGEIMEAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGEALNPSESFNLGMPQMPFAGSNFFSIPLHSGPAGHQNMQLPPFGHSPSGVPTYQLQQTNSHQISDILQNDQLGRLQGLDISSKGTPVVKSEGPSISANESSTTF 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1305 386 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 383 - -
Ssu9g1305 386 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 249 IPR004827 GO:0003700|GO:0006355
Ssu9g1305 386 CDD bZIP_plant_RF2 189 238 IPR044759 GO:0003700|GO:0006355
Ssu9g1305 386 PANTHER BZIP TRANSCRIPTION FACTOR 1 383 - -
Ssu9g1305 386 SUPERFAMILY Leucine zipper domain 188 239 IPR046347 GO:0003700|GO:0006355
Ssu9g1305 386 MobiDBLite consensus disorder prediction 47 63 - -
Ssu9g1305 386 Pfam bZIP transcription factor 188 243 IPR004827 GO:0003700|GO:0006355
Ssu9g1305 386 Gene3D - 187 240 - -
Ssu9g1305 386 MobiDBLite consensus disorder prediction 1 88 - -
Ssu9g1305 386 SMART brlzneu 184 248 IPR004827 GO:0003700|GO:0006355
Ssu9g1305 386 MobiDBLite consensus disorder prediction 109 161 - -
Ssu9g1305 386 MobiDBLite consensus disorder prediction 122 136 - -
Ssu9g1305 386 MobiDBLite consensus disorder prediction 315 335 - -
Ssu9g1305 386 MobiDBLite consensus disorder prediction 369 386 - -
Ssu9g1305 386 Coils Coil 204 231 - -
Ssu9g1305 386 MobiDBLite consensus disorder prediction 363 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1305 Ssu-Chr9 47240910 47244312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1305 9 386 bZIP Transcription Factor Family AT2G40620 49.148 7.69e-102 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu9g1305 bZIP_1 6.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1305 - - gmx:100775607 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1305 9 47240910 47244312 Ssu9g1305 9 47240910 47244312 ECH
Ssu9g1305 9 47240910 47244312 Ssu6g2777 6 64395944 64398439 PCT