Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1300 ATGGCAACCCAAATGATCAAGAAGAGAAAGTTCGTAGCCGATGGAGTGCTCTTCACTAAGCTAAATGAGGCTAAGTCTTTCTACTACAAGCTCCTTATTGGTTTTATTGTATGTAAGGCCTGTTATGGTGTTTTGGAATTTGTTATAAAGAGTGGTGCCAAGGGATGTGAGGTTATTGTGAGTGAAAAATTGAGAGCCAAAGAGAAAAATTCTTGA 216 0.3843 MATQMIKKRKFVADGVLFTKLNEAKSFYYKLLIGFIVCKACYGVLEFVIKSGAKGCEVIVSEKLRAKEKNS 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1300 71 Gene3D - 22 71 IPR036419 -
Ssu9g1300 71 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 2 24 - -
Ssu9g1300 71 PANTHER 40S RIBOSOMAL PROTEIN S3-1-RELATED 2 24 - -
Ssu9g1300 71 PANTHER 40S RIBOSOMAL PROTEIN S3-1-RELATED 24 69 - -
Ssu9g1300 71 SUPERFAMILY Ribosomal protein S3 C-terminal domain 23 68 IPR036419 -
Ssu9g1300 71 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 24 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1300 Ssu-Chr9 47092990 47093422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1300 3 71 Cytoplasmic Ribosomal Protein Gene Family AT3G53870 51.250 1.30e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1300 K02985 - egr:104436434 65.0846