Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1299 ATGCTCGCACATAATGGGCCTTTCATCAACTTGGATCACTTGGACCTCCAAGTCCTTATTGTAGTGCATCTTCAAGTTTTGCTCCCTTCGGGCCTCAAATGGGGTCTACTTGGTCTCCATCAAAGTTCAGTTCTTCAAATCTCAAAATATGAGATGACAAACAATAGCTCACTAGAACAACAAATTTCAGTTTTAGAGAAGAAGAGGACTTGCAATATTGGGCCTAAAAGTAAGAGGTTGCATATTGATAATGAAGATGCTATGGAATTGAATCTTACATGGGAAGAAACACAATATTTGCTTCGTCCTCCTCCTAGTGTCAAGCCAAGCATTGTTACAATTGAGGGCCAAGTATCTGAAGAATACGATGAACCCCCAGTTTTTGGAAAGAGAACTATATTCAGTGCCTTTTCATCTGGACATGTTCTGAAAATGTTTGGGATTGAAGTAGATTTTAAGAAGCGGCGAATTGTAGAAAACAGCAAGTCAATCCAAGAACATGAGCCTTCTGGCTTGGATGCTCTTGCCAGTGCAGCAGTTCTTGGAGAAAATCTAGTTGACACTGCCGAATTGTCCGCTGGAGCCACCACCAAACATCCTAGACACCATGCTGCCCAAAAAGATCAAGTTCTCCAAAAAGACGAGTCGGATACAAATGGAGCATCAAGACTGAATACAAGTAATTTGGAGAAAGAGGTAGGACTTAACAGAAGTCAAGCTGAAGTGGGTGAGTCCAGTGCTGGACAGATAGATCTGAATTCTCATCCCAACCGCGAAGACATGCAAGTGGATATCACAGGACTTAACATGTCTAGTCATCTTGAAACAATAGCAAACCATACTGTGAGGGAATATATGAACCATAATGGCCTAAGAAGCTTTAACAATGAAGTGCAGAATGGTTAG 906 0.415 MLAHNGPFINLDHLDLQVLIVVHLQVLLPSGLKWGLLGLHQSSVLQISKYEMTNNSSLEQQISVLEKKRTCNIGPKSKRLHIDNEDAMELNLTWEETQYLLRPPPSVKPSIVTIEGQVSEEYDEPPVFGKRTIFSAFSSGHVLKMFGIEVDFKKRRIVENSKSIQEHEPSGLDALASAAVLGENLVDTAELSAGATTKHPRHHAAQKDQVLQKDESDTNGASRLNTSNLEKEVGLNRSQAEVGESSAGQIDLNSHPNREDMQVDITGLNMSSHLETIANHTVREYMNHNGLRSFNNEVQNG 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1299 301 MobiDBLite consensus disorder prediction 215 257 - -
Ssu9g1299 301 MobiDBLite consensus disorder prediction 194 257 - -
Ssu9g1299 301 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 153 203 - -
Ssu9g1299 301 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 204 298 - -
Ssu9g1299 301 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 38 141 - -
Ssu9g1299 301 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 204 298 - -
Ssu9g1299 301 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 38 141 - -
Ssu9g1299 301 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 153 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1299 Ssu-Chr9 46963339 46966038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1299 64 263 B3 DNA Binding Superfamily AT2G30470 36.042 3.20e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1299 - - gmx:100789147 320.857