Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1294 ATGGGTAATAACAGGTTCAGATTGTCAGATATGATGCCAAATGCATGGTTCTATAAGCTCAAAGATATGAGcaaatcaagaaagagaaatggCCCTCATGTTATGAAGAACAAAGTAACCTCACCAACAACATCCCAAAGGTACTCTCATTATATCTCCACTGAACCAAACATAGCTGGTAAGTTATACAACTCTCCTATTTACACTAAACACTCAGACAACACATTCACTGATTCACCAAGAAGGTCATCCAAGAGGAGGGCTAAGAGAAAAACCATTTATAAGCCCTCTCCCACTTTTGTCTCTTCACCAGTCATAGAAAGTTTTAGTTGTCATTCCACAAACAATTGGATTAAGCCAAATCAACCCGAGTCTCCAGACTATTATCGCTCCCCCTTAGAGAGTTCTTCTGAATCAAACTTCCATGAATATGTTTCATCTGAGTCTGAGTGTGATAAGTACACTCTTCCTGACTTGCTTAATGGTCTAGCCTCTGAATGCAGTTGTAGAGTTAGCTCTTCCACCAATGACATCATCATTGACATGAAAAATGAACCCTTCACTGGAAATTCTGAAAATCTTGATGGGTTTGACACAATTTCACAGTTAGGCCTTGCTCCAATATTGACAAAGCCAGTGAAGTTTGATGATAAGGTCATTGAAGCCACTGAGTTGAGAAGATCAACTAAATTTGATGAGCTAAAGGCTCATCAGTCTCTATCTGTCAAAGTTAGCAAAGAGGAAAGTCGTAGaactaagagagagagaaaaacaagTCCAGTAGCTAGAATTTCCTCTGCTAATTCTACAGGTATAAGACTTAGAGTCAATTCTCCAAAACTTGCAAGCAAGAAAGTTCAAGCCTATGCAAGAAGGAGTGTGTCATCCAAAGCATGCAAAGCCTCAATGAATGCAGGCTTTCCAGAGGGATTTGCAGTTGTTAAGTCCTCCCTTGATCCACAAAGAGACTTCAGGGAGTCAATGGTGGAGATGATTGATGAGAACAATATCCACGAATCAAAAGATTTGGAGAACTTGCTTGCCTGCTACCTTTCACTGAATTCAAGGGAATACCATGATCTCATTGTCAAAGCATTTGAGCAAATTTGGTATGACATGGCTCAACTTAGAATGTAA 1137 0.3826 MGNNRFRLSDMMPNAWFYKLKDMSKSRKRNGPHVMKNKVTSPTTSQRYSHYISTEPNIAGKLYNSPIYTKHSDNTFTDSPRRSSKRRAKRKTIYKPSPTFVSSPVIESFSCHSTNNWIKPNQPESPDYYRSPLESSSESNFHEYVSSESECDKYTLPDLLNGLASECSCRVSSSTNDIIIDMKNEPFTGNSENLDGFDTISQLGLAPILTKPVKFDDKVIEATELRRSTKFDELKAHQSLSVKVSKEESRRTKRERKTSPVARISSANSTGIRLRVNSPKLASKKVQAYARRSVSSKACKASMNAGFPEGFAVVKSSLDPQRDFRESMVEMIDENNIHESKDLENLLACYLSLNSREYHDLIVKAFEQIWYDMAQLRM 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1294 378 Pfam Transcriptional repressor, ovate 317 373 IPR006458 -
Ssu9g1294 378 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 377 - -
Ssu9g1294 378 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 377 IPR038933 GO:0045892
Ssu9g1294 378 MobiDBLite consensus disorder prediction 243 260 - -
Ssu9g1294 378 MobiDBLite consensus disorder prediction 27 46 - -
Ssu9g1294 378 MobiDBLite consensus disorder prediction 70 94 - -
Ssu9g1294 378 ProSiteProfiles OVATE domain profile. 313 372 IPR006458 -
Ssu9g1294 378 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 311 373 IPR006458 -
Ssu9g1294 378 MobiDBLite consensus disorder prediction 243 262 - -
Ssu9g1294 378 Pfam DNA-binding domain 1 46 IPR025830 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1294 Ssu-Chr9 46826165 46827301 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Ssu9g1294 Ovate 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1294 - - gmx:100798120 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1294 9 46826165 46827301 Ssu9g1294 9 46826165 46827301 ECH
Ssu9g1294 9 46826165 46827301 Ssu6g2767 6 64239785 64240927 PCT