Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1284 ATGACTTGGATCATTAGAAGAATGGCACTTTCTCCTTTtcgttcttcttctttctcttcatcaGCTGTTGTTGCATTATTATTAGCTGTGTTACTGCTTCTTGCAGGGACCTCTTCGGCTCAACTCTCAAAGAACTTCTATTCTAAGAAATGTCCCAATGTTTTTAACACTGTAAAATCTGTTGTTAGATCTGCTGTGGCCAAAGAACCTCGCATTGGAGCATCTATTCTTCGCCTCTTCTTCCATGACTGCTTTGTTGATGGCTGTGATGGGTCATTACTACTTGATGACACTCCATCCTTCTTGGGAGAGAAGACTGCAGCTCCAAACAACAATTCTGTGAGAGGTTTTGAAGTAATTGATGCTATCAAGTCTAAGGTGGAGAAAATATGCCCCGGTCTGGTCTCATGTGCTGATATCTTGGCCATTGCTTCTCGTGACTCTGTTGTGCTCCTTGGAGGGCCCTTTTGGAAAGTTAAACTTGGAAGAAGGGATTCCAGAACAGCCAACTTCACTGCTGCTAACACTGGTGTTATTCCACCTCCCACATCTAACCTCAGCAACCTTATCACAACGTTTCAAGCTCAAGGACTCTCTGTTACGGACATGGTTGCCTTATCtgGATCTCACACAATTGGCAAAGCAAGGTGCACTAGTTTCAGAGGTCGCATATACAATCAAAGCAATATTGAGAGAACATTTGCATTGGCCAGGCAGAGGAGGTGTCCAAGGACTAATGGCACAGGAGACAACAATCTGGCAATTCTAGACTTCAGAACTCCAAATCATTTTGACAACAACTACTTCAAGAACCTCCTCATCAAAAGGGGACTCCTCAATTCTGATCAGGTGCTTTTCAATGGTGGATCTACTGATTCACTGGTCAGAACTTACAGCCAGAATGACAAGGCCTTTGATTTTGACTTTGTTACTGCAATGATTAAAATGGGAAATAACAAACCCTTAACTGGGTCACAAGGGGAGATTAGGAGGAACTGCAGGAGAGTGAATTAG 1014 0.4211 MTWIIRRMALSPFRSSSFSSSAVVALLLAVLLLLAGTSSAQLSKNFYSKKCPNVFNTVKSVVRSAVAKEPRIGASILRLFFHDCFVDGCDGSLLLDDTPSFLGEKTAAPNNNSVRGFEVIDAIKSKVEKICPGLVSCADILAIASRDSVVLLGGPFWKVKLGRRDSRTANFTAANTGVIPPPTSNLSNLITTFQAQGLSVTDMVALSGSHTIGKARCTSFRGRIYNQSNIERTFALARQRRCPRTNGTGDNNLAILDFRTPNHFDNNYFKNLLIKRGLLNSDQVLFNGGSTDSLVRTYSQNDKAFDFDFVTAMIKMGNNKPLTGSQGEIRRNCRRVN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1284 337 Pfam Peroxidase 58 301 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 CDD secretory_peroxidase 41 336 IPR033905 GO:0004601|GO:0042744
Ssu9g1284 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Ssu9g1284 337 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 ProSiteProfiles Plant heme peroxidase family profile. 41 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PANTHER PEROXIDASE 20 336 - -
Ssu9g1284 337 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Ssu9g1284 337 Gene3D - 45 337 - -
Ssu9g1284 337 Gene3D Peroxidase, domain 2 180 316 - -
Ssu9g1284 337 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 SUPERFAMILY Heme-dependent peroxidases 41 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu9g1284 337 PANTHER PEROXIDASE 72-RELATED 20 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1284 Ssu-Chr9 46668726 46673904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1284 26 337 Peroxidase AT5G58400 66.026 1.13e-153 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1284 K00430 - gmx:100813384 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1284 9 46668726 46673904 Ssu9g1284 9 46668726 46673904 ECH
Ssu6g2756 6 64032755 64036958 Ssu9g1284 9 46668726 46673904 ECH
Ssu4g2479 4 62279069 62282509 Ssu9g1284 9 46668726 46673904 ECH
Ssu9g1284 9 46668726 46673904 Ssu6g2756 6 64032755 64036958 PCT