Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1283 ATGGCACTTTCTCCTTTtcgttcttcttctttctcttcatcaGCTATTGTTGCATTATTATTAGCTGTGTTACTGCTTCTTGCAGGGACCTCTTCGGCTCAACTCTCAAAGAACTTCTATTCTAAGAAATGTCCCAATGTTTTTAACACTGTAAAATCTGTCGTTAGATCTGCTGTGGCCAAAGAACCTCGCATCGGAGCATCTATTCTTCGCCTCTTCTTCCATGACTGCTTTGTTGATGGCTGTGATGGGTCATTACTACTTGATGACACTCCATCCTTCCTGGGAGAGAAGACTGCAGCTCCAAACAACAATTCTGTGAGAGGTTTTGAAGTAGTTGATGCTATCAAGTCTAAGGTGGAGAAAATATGCCCCGGTCTGGTCTCATGTGCTGATATCTTGGCCATTGCTTCTCGTGACTCTGTTGTGCTCCTTGGAGGGCCCTTTTGGAAAGTTAAACTTGGAAGAAGGGATTCCAGAACAGCCAACTTCACTGCTGCTAACACTGGTGTTATTCCACCTCCCACATCTAACCTCAGCAACCTTATCACAACGTTTCGAGCTCAAGGACTCTCTGTCAGGGACATGGTTGCCTTGTCtgGATCTCACACAATTGGCAAAGCAAGGTGCACTAGTTTCAGAGGTCGCATATACAATCAAAGCAACATTGACAGAACATTTGCATTGGCCAGGCAGAGGAGGTGTCCAAGGACTAATGGCACAGGAGACAACAATCTGGCAATTCTAGACTTCAGAACTCCAAATCATTTTGACAACAACTACTTCAAGAACCTCCTCATCAAAAGGGGACTCCTCAATTCTGATCAGGTGCTTTTCAATGGTGGATCTACTGATTCACTGGTCAGAACTTACAGCCACAATGACAAGGCCTTTGATTCTGACTTTGTTACTGCAATGATTAAAATGGGAAATAACAAACCCTTAACTGGGTCACAAGGGGAAATTAGGAGGAACTGCAGGAGAGTGAATTAG 993 0.43 MALSPFRSSSFSSSAIVALLLAVLLLLAGTSSAQLSKNFYSKKCPNVFNTVKSVVRSAVAKEPRIGASILRLFFHDCFVDGCDGSLLLDDTPSFLGEKTAAPNNNSVRGFEVVDAIKSKVEKICPGLVSCADILAIASRDSVVLLGGPFWKVKLGRRDSRTANFTAANTGVIPPPTSNLSNLITTFRAQGLSVRDMVALSGSHTIGKARCTSFRGRIYNQSNIDRTFALARQRRCPRTNGTGDNNLAILDFRTPNHFDNNYFKNLLIKRGLLNSDQVLFNGGSTDSLVRTYSHNDKAFDSDFVTAMIKMGNNKPLTGSQGEIRRNCRRVN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1283 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Ssu9g1283 330 Gene3D - 38 330 - -
Ssu9g1283 330 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PANTHER PEROXIDASE 13 329 - -
Ssu9g1283 330 ProSiteProfiles Plant heme peroxidase family profile. 34 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Ssu9g1283 330 Pfam Peroxidase 51 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 Gene3D Peroxidase, domain 2 173 309 - -
Ssu9g1283 330 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 SUPERFAMILY Heme-dependent peroxidases 34 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 PANTHER PEROXIDASE 72-RELATED 13 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1283 330 CDD secretory_peroxidase 34 329 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1283 Ssu-Chr9 46635977 46640719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1283 19 330 Peroxidase AT5G58390 68.269 1.56e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1283 K00430 - gmx:100813384 557.755