Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1282 ATGGCTTCTAATATCCAATCTCTGCTTGTGCTTGTTCTGGCCACTTTGGCCACATTCATGATCCCTTCCAATGCACAGCTTTCTCCTGATTTCTATAAGAAAGTTTGTCCCCAGGCATTGCCAGTCATAAGGTCAGTCGTTCACCGAGCAATTATTCGTGAAGGGCGCATTGGAGCATCCTTGCTGCGTTTGCATTTCCATGACTGCTTTGTTAATGGCTGTGATGGATCAGTTCTGCTGGATGACACGAGGAACTTCACTGGCGAGAAAACAGCCCTACCAAATCTGAATTCAATAAGAGGTTTTGATGTGGTTGATGAGATCAAAGCAGCAGTTGACAAAGCTTGCAAACGCCCTGTGGTATCATGTGCAGATATCTTAGCTACTGCTGCTCGTGATTCTGTGGCCATATTGGGGGGTCCACAGCTATGGTATCCCGTATTGCTAGGCAGAAGAGACGCAAGAACAGCAAGCAGGGATGCTGCAAACACCAATCTCCCTCCCCCATTTTTCAGCTTCTCACAGCTTCTCTCCAACTTCAACTCTCACGGATTGGACCTCAGAGACCTAGTGGCACTCTCTGGCGGCCACACCATTGGCTTTGCCAGGTGCACCACCTTCAGGGACCGCATCTACAACGACACCAACGTAAACCCCACGTTTGCAGCCTCTTTGCGCAAGCAGTGCCCTCGAGTCGGCGGTGACAACAACCTGGCCACGTTGGATCCAACTCCTGCATCGGTTGACACCTCATACTACAGGGAATTGCTGTGCAAAAAGGGTCTCCTTCACTCTGACCAAGAACTCTACAAGGGTGACGGCGGTGAAAGTGACAGGTTGGTGGAGCTGTATAGCAGGAACCCTTTTGCGTTTGCCAAAGACTTTAAGGCTTCTCTGATCAAGATGGGGAACATGAAGCCTCTTACTGGGAACAAGGGAGAGATCAGAGGCAATTGCAGAAAACTCCAATATTTCCTTGTGCTTGCCCTGGCCACACTGGTCACAATCCCTTCTCATGCACAACTCACGCCTGATTTTTACGACAATGTTTGCCCTCAGGCACTGCCCATCATTAAGTCAGTTGTTCAGCGAGCAATATTCCGTGAACGGCGTATGGGAGCATCTTTACTTCGTTTGCATTTCCATGATTGTTTTGTCAATGGCTGCGATGGATCAGTTCTGCTGGATGACACCCCTAACATCAATGGGGAGAAGACTGCCCTCCCAAATATGGGTTCAATTAGAGGTTTGGAGGTGGTTGATGAAATTAAAGCAGCGGTTGACAAAGCTTGCAAACGTCCTGTGGTATCATGTGCAGATATCTTAGCTATAGCCGCTCGTGATTCTGTGTCCATATTGGGGGGCCCACTCTATTGGTACAAAGTGTTACTGGGCAGAAGGGATGCAACAACTGCTAGCAAGGATGCTGCAAACTCAAATCTTCCTCCCCCATTTTTCAGGTTCTCCCAGCTTCTTTCCAATTTTCAGTCTCATGGGTTGGACCTTAAAGATCTCGTGGCTCTCTCTGGTGCACACACCATTGGATTTGCACAATGCTCTACCTTTAGGAATAGGATCTACAATGACACCAACATAGACCCCAACTTTGCATCTTCTTTGCAGGGTACCTGCCCTAGAAGTGGTGGAGATAGTAATCTGGCAGCACTGGATCGTGTCTCTCCCTCAAGAGTTGACCCTTCATACTATACCGCTTTGCTAAATAAAAAGGGTCTCCTCCATTCTGATCAAGAGCTCTTCAAAGGAGATGGCAGTGCAAGTGACACTTTGGTGAAGCTTTACAGCAAGAACCCATTTGCTTGTGCTAGAGATTTTAAAGCTTCCATGATCAAGATGGGTAGCATGAAGCCTCTCACTGGAAATGTTGGAGAGATTAGAATCAATTGTAGAACAatggCTTTCCATCTCCAATATTTCATTGTGTTTGCCATGGCCACACTTGTCACAATCCCTTCTCATGCACATCTCACTCATGATTTTTACGACAAAGTTTGCCCTCAGGCACTGCCTATCATTAAGTCAGTTGTTCAGCGAGCAATATTCCGTGAACGGCGCATGGGAGCATCTTTACTGCGTTTGCATTTCCATGATTGTTTTGTCAATGGCTGTGATGGATCAGTTCTATTCGATGACACCCCTAACTTCACTGGGGAAAAGACTGCCCTCCCAAATATGGGCTCAATTAGAGGTTTTGAAGTGGTTGATGAGATCAAAGCAGCGGTTGACAAAGCTTGCAAACGCCCTGTGGTATCATGTGCTGATATCTTAGCCATTGCCGCTCGTGATTCTGTGTCCATATTGGGAGGCCCACTCTACTGGTACAAAGTGTTACTAGGCAGAAGGGATGCAAGAACCGCTAGCAAAGATGTTGTAAACTCAAATCTTCCTCCCCCATTTTTCAGCTTCTCCCAGCTTCTTTCCAATTTTCAGTCTCATGGATTGGACCTTAAAGATCTTGTAGCTCTTTCTGGTGCTCACACCATTGGATTTGCGGAATGCTCTTCCTTTAGGAACAGGATCTACAATGACACCAACATAGACCCCAACTTTGCATCTGCTTTGCGAGGCACGTGCCCTAGAACTGGTGGAGATAACAATTTGGCAGCACTGGATCATGTCACTCCCATAAGAGTTGACACTTCATACTACACGGCTTTGCTAAGTAAAAAGGGTCTCCTCCATTCTGATCAAGAGCTCTTCAAAGGAGATGGTAGTGAAAGCGACACTTTGGTGAAGCTCTACAGCATGAACCCATTTGCATTTGCTAGAGATTTTAAAGCTTCCATGATCAAGATGGGTAACATGAAGCCTCTTATTGGGAATGCTGGAGAGATCAGAGTCAATTGTAGAAGAGTCAACTAA 2880 0.466 MASNIQSLLVLVLATLATFMIPSNAQLSPDFYKKVCPQALPVIRSVVHRAIIREGRIGASLLRLHFHDCFVNGCDGSVLLDDTRNFTGEKTALPNLNSIRGFDVVDEIKAAVDKACKRPVVSCADILATAARDSVAILGGPQLWYPVLLGRRDARTASRDAANTNLPPPFFSFSQLLSNFNSHGLDLRDLVALSGGHTIGFARCTTFRDRIYNDTNVNPTFAASLRKQCPRVGGDNNLATLDPTPASVDTSYYRELLCKKGLLHSDQELYKGDGGESDRLVELYSRNPFAFAKDFKASLIKMGNMKPLTGNKGEIRGNCRKLQYFLVLALATLVTIPSHAQLTPDFYDNVCPQALPIIKSVVQRAIFRERRMGASLLRLHFHDCFVNGCDGSVLLDDTPNINGEKTALPNMGSIRGLEVVDEIKAAVDKACKRPVVSCADILAIAARDSVSILGGPLYWYKVLLGRRDATTASKDAANSNLPPPFFRFSQLLSNFQSHGLDLKDLVALSGAHTIGFAQCSTFRNRIYNDTNIDPNFASSLQGTCPRSGGDSNLAALDRVSPSRVDPSYYTALLNKKGLLHSDQELFKGDGSASDTLVKLYSKNPFACARDFKASMIKMGSMKPLTGNVGEIRINCRTMAFHLQYFIVFAMATLVTIPSHAHLTHDFYDKVCPQALPIIKSVVQRAIFRERRMGASLLRLHFHDCFVNGCDGSVLFDDTPNFTGEKTALPNMGSIRGFEVVDEIKAAVDKACKRPVVSCADILAIAARDSVSILGGPLYWYKVLLGRRDARTASKDVVNSNLPPPFFSFSQLLSNFQSHGLDLKDLVALSGAHTIGFAECSSFRNRIYNDTNIDPNFASALRGTCPRTGGDNNLAALDHVTPIRVDTSYYTALLSKKGLLHSDQELFKGDGSESDTLVKLYSMNPFAFARDFKASMIKMGNMKPLIGNAGEIRVNCRRVN 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1282 959 Gene3D - 665 956 - -
Ssu9g1282 959 CDD secretory_peroxidase 661 958 IPR033905 GO:0004601|GO:0042744
Ssu9g1282 959 SUPERFAMILY Heme-dependent peroxidases 341 637 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PRINTS Haem peroxidase superfamily signature 504 519 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PRINTS Haem peroxidase superfamily signature 373 387 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PRINTS Haem peroxidase superfamily signature 877 892 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PRINTS Haem peroxidase superfamily signature 436 453 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 Gene3D - 345 636 - -
Ssu9g1282 959 ProSitePatterns Peroxidases active site signature. 373 384 IPR019794 GO:0004601
Ssu9g1282 959 CDD secretory_peroxidase 341 636 IPR033905 GO:0004601|GO:0042744
Ssu9g1282 959 PANTHER CATIONIC PEROXIDASE 640 958 - -
Ssu9g1282 959 ProSiteProfiles Plant heme peroxidase family profile. 341 639 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PANTHER PEROXIDASE 72-RELATED 640 958 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PANTHER PEROXIDASE 72-RELATED 325 638 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PANTHER PEROXIDASE 72-RELATED 9 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 CDD secretory_peroxidase 26 321 IPR033905 GO:0004601|GO:0042744
Ssu9g1282 959 PANTHER CATIONIC PEROXIDASE 325 638 - -
Ssu9g1282 959 PANTHER CATIONIC PEROXIDASE 9 322 - -
Ssu9g1282 959 ProSitePatterns Peroxidases active site signature. 693 704 IPR019794 GO:0004601
Ssu9g1282 959 ProSitePatterns Peroxidases proximal heme-ligand signature. 504 514 IPR019793 -
Ssu9g1282 959 SUPERFAMILY Heme-dependent peroxidases 662 959 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Ssu9g1282 959 Gene3D Peroxidase, domain 2 167 302 - -
Ssu9g1282 959 Gene3D Peroxidase, domain 2 482 618 - -
Ssu9g1282 959 Gene3D Peroxidase, domain 2 802 938 - -
Ssu9g1282 959 PRINTS Plant peroxidase signature 933 946 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PRINTS Plant peroxidase signature 823 835 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PRINTS Plant peroxidase signature 671 690 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PRINTS Plant peroxidase signature 695 715 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PRINTS Plant peroxidase signature 875 890 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PRINTS Plant peroxidase signature 735 748 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PRINTS Plant peroxidase signature 755 765 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 PRINTS Plant peroxidase signature 891 908 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 ProSitePatterns Peroxidases proximal heme-ligand signature. 824 834 IPR019793 -
Ssu9g1282 959 SUPERFAMILY Heme-dependent peroxidases 26 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Ssu9g1282 959 Gene3D - 30 320 - -
Ssu9g1282 959 Pfam Peroxidase 359 601 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 Pfam Peroxidase 679 920 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1282 959 ProSiteProfiles Plant heme peroxidase family profile. 661 959 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1282 Ssu-Chr9 46573623 46612571 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1282 659 959 Peroxidase AT5G05340 56.766 7.09e-111 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1282 K00430 - cqi:110690628 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1282 9 46573623 46612571 Ssu9g1282 9 46573623 46612571 ECH
Ssu9g1282 9 46573623 46612571 Ssu6g2752 6 63971356 63974195 PCT