Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1281 ATGGCTTTCCATTCACGTTATAACATATTttgcttctttattttgttttctctacttGGCATAGCCTCTGCTCAGCTATCTTCAGATTTCTATGGAGCAACATGCCCCAAGGCCCTCTCTACCATAAAATCTGCAGTGCAAAGTGCAGTTGCCAAAGAGCATCGCATGGGCGCGTCCTTGCTCCGTCTTCATTTCCATGATTGTTTTGTTAATGCACGTTCTTTCTTCACTCCCTATTCCTTCATTTGTTTCACTCTCTCATTCATGCATATTTCACCTTGCATGAACATGCATGGATGTGATGCATCAGTTCTGTTAGATGACACTTCGAGCTTCACGGGAGAGAAGTCAGCCGGTGCAAATGTGAATTCTTTGAGGGGTTTTGATGTAATTGACGACATCAAAAGTCAATTGGAGACTGCTTGTCCTGGAATTGTTTCCTGTGCTGATATTCTTGTTGTTGCTGCTCGTGATTCTGTCGTAGCATTGGGTGGTCCATCATGGACTGTTGGGTTAGGCAGACGAGATTCAACCACTGCAAGTAAAGATGCTGCCACCAAGGATATCCCATCCCCTCTAATGGATCTTAGTGATCTCATATCTGCCTTTTCAAATAAGGGGTTTACCACCCAAGAGATGGTAGTCCTCTCAGGAGCTCATACAACAGGGCAAGCCAAATGCCAGTTCTTCCGGGGTCGGATTTACAATGAAACCaacattgattcaaattttgcaACATCATTGAAGTCAAATTGTCCAAGCATTGATGGTGACAGCAACCTCTCCCCACTTGATGTCACCACCAATGTGTACTTTGACAATGCTTATTTCAAGAATCTAGTGAACAAGAAAGGGCTTCTACATTCTGATCAGCAACTTTTCAGTGGTGGTTCTACAGATTCTCAGGTCACTACCTATAGCACCAGCCCTTCAACTTTCTATGCAGACTTTGCTAGTGCCATGGTCAAAATGGGAAACCTCAGCCCTTTAACAGGGAACAGTGGTCAAATTCGTACTAACTGCCGCAAAGTTAACTAA 1038 0.4229 MAFHSRYNIFCFFILFSLLGIASAQLSSDFYGATCPKALSTIKSAVQSAVAKEHRMGASLLRLHFHDCFVNARSFFTPYSFICFTLSFMHISPCMNMHGCDASVLLDDTSSFTGEKSAGANVNSLRGFDVIDDIKSQLETACPGIVSCADILVVAARDSVVALGGPSWTVGLGRRDSTTASKDAATKDIPSPLMDLSDLISAFSNKGFTTQEMVVLSGAHTTGQAKCQFFRGRIYNETNIDSNFATSLKSNCPSIDGDSNLSPLDVTTNVYFDNAYFKNLVNKKGLLHSDQQLFSGGSTDSQVTTYSTSPSTFYADFASAMVKMGNLSPLTGNSGQIRTNCRKVN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1281 345 PANTHER PEROXIDASE 18 71 - -
Ssu9g1281 345 PANTHER PEROXIDASE 88 345 - -
Ssu9g1281 345 SUPERFAMILY Heme-dependent peroxidases 25 345 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 PANTHER PEROXIDASE 72-RELATED 18 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 PRINTS Plant peroxidase signature 211 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 PRINTS Plant peroxidase signature 145 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 PRINTS Plant peroxidase signature 319 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 PRINTS Haem peroxidase superfamily signature 212 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 Gene3D - 29 342 - -
Ssu9g1281 345 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Ssu9g1281 345 CDD secretory_peroxidase 25 344 IPR033905 GO:0004601|GO:0042744
Ssu9g1281 345 Pfam Peroxidase 43 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 PANTHER PEROXIDASE 72-RELATED 88 345 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu9g1281 345 Gene3D Peroxidase, domain 2 190 324 - -
Ssu9g1281 345 ProSiteProfiles Plant heme peroxidase family profile. 25 345 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1281 Ssu-Chr9 46538655 46541514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1281 21 345 Peroxidase AT5G05340 58.104 5.05e-135 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1281 K00430 - gmx:100818176 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1281 9 46538655 46541514 Ssu9g1281 9 46538655 46541514 ECH
Ssu9g1281 9 46538655 46541514 Ssu6g3108 6 70638229 70640552 ECH