Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1280 ATGGAAAATAAGATTACCTACATACAGTTGCCCAACTCCCCACTAAACTCATGGTTGACGTACCTTTCTTTTGGGCTTTCAGAATGCAGCTATGCAAGGGTTGCTCTGGTATTTCATCTTTGGTGTCATTGTCTTCATTCCATCTCTTTTGGATTACTTCTACAGGGAAAGTGTATTTCAAGACCAGCTTCAATTGTGGCAGTGAGACTCCAAACATCAGGTGcatctttcttatttctcaacaaaaCTGACCTTGCCCTCTACATCAGCACCGCAATGATTGGAGCGTTTACTGGACCAATCACTTCCATTGTTGTTTCCATAACCACTGAGCTATTTGGTACTCAGCAGCACTCATTTAGCGTAAGGATTGACATGAACATGGACAAGGAAAATGCATGGGCATGGAATGCTATAGAAACACTTTTATCATCTGGGGTTCCTTTTGTGTCCTTGGCACTTTCTTGGCTTTGA 474 0.4072 MENKITYIQLPNSPLNSWLTYLSFGLSECSYARVALVFHLWCHCLHSISFGLLLQGKCISRPASIVAVRLQTSGASFLFLNKTDLALYISTAMIGAFTGPITSIVVSITTELFGTQQHSFSVRIDMNMDKENAWAWNAIETLLSSGVPFVSLALSWL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1280 157 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 55 120 - -
Ssu9g1280 157 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 55 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1280 Ssu-Chr9 46534915 46537090 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1280 60 117 Nodulin-like Gene Family AT2G30300 44.828 9.01e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1280 - - gmx:100793370 82.0333