Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1278 atggttTCCAGGGTTCACAAGAGAACAGCCATGTACAGGAACCTACAACTGCTTCGTTCAATCAGATACTCCCACTCGCGCCCTAAAGCCTCAGTGTTATTGGATGTGTCAGATTACATACAAAGTTTAAAGCAAAAGCTGCAAGAATTGAACCAGTTAACAGTGGCAACGGCACGAAAAATCGTTGACTATGATCCAATGCCTAAGCTTGAAGTTGaaacacaagaagagggttTTGTGATCAAGGTGCTGAGTCAAAGCAGTTGCCAGGGGTTGCTGGTGTTTATATTGGAAGCCTTTGAAGAGCTGGGTCTTGATGTACTCCAGGCTAGGGTTTCTTGTGAGGACAACTTCAGTTTAGAAGCTCTCGGAAACAAAGTAATGATACACATACATAATTATCTAAATCACAAGAGCAATACTAATTGTGTTGAGTGCAATGTTTGTAGGCACAATCAATCAAACACTTTgggtaaaattaaaatattttcagtaccaattttactttaa 510 0.3647 MVSRVHKRTAMYRNLQLLRSIRYSHSRPKASVLLDVSDYIQSLKQKLQELNQLTVATARKIVDYDPMPKLEVETQEEGFVIKVLSQSSCQGLLVFILEAFEELGLDVLQARVSCEDNFSLEALGNKVMIHIHNYLNHKSNTNCVECNVCRHNQSNTLGKIKIFSVPILL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1278 169 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 130 - -
Ssu9g1278 169 Coils Coil 33 60 - -
Ssu9g1278 169 PANTHER TRANSCRIPTION FACTOR BHLH93-LIKE PROTEIN 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1278 Ssu-Chr9 46503771 46504963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1278 - - gmx:100527278 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1278 9 46503771 46504963 Ssu9g1278 9 46503771 46504963 ECH
Ssu9g1278 9 46503771 46504963 Ssu6g3102 6 70575736 70577236 ECH
Ssu9g1278 9 46503771 46504963 Ssu4g2472 4 62078262 62080018 ECH
Ssu6g2747 6 63905283 63907253 Ssu9g1278 9 46503771 46504963 ECH
Ssu3g0998 3 23468600 23470234 Ssu9g1278 9 46503771 46504963 ECH
Ssu4g2472 4 62078262 62080018 Ssu9g1278 9 46503771 46504963 ECH
Ssu9g1278 9 46503771 46504963 Ssu6g2747 6 63905283 63907253 PCT