Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1277 ATGACTTCTACTACTCTTCAATGGCTAAGCCTTGTGGGCATCATTTGGCTCCAAGCCATAGTAGGGACAAACACCAATTTCCCTGCTTACTCTTCTCAGCTGAAAGAGCTTCTTTCCATCTCCCAAGTGCAACTCAATAACCTTGCTTTTGCCTCTGATGCAGGGAAGCTTTTTGGCTGGTTTTCTGGCCTTGCTTCTCTTTACCTCCCCCTCTGGCTAGTCCTCTTGATTGGTTCAACTCTTGGGCTAATCGGTTATGGTGTGCAGTATCTCTTCATAACTAACCATATTTCCTCTTTGTCCTATTGGCATGTCTTCTTACTAACTTTTCTAGCTGGCAATAGCATTTGTTGGATTAACACAGTATGCTATGTTGTCATCATAAGGAACTTCCCATCTGATCGCCAAGTTGCCGTGGGAATAACAACTAGTTACCAAGGACTAAGTGCAAAGATTTATGCCAACATTGTTGATGCTGTTTCTCCTCACAAGAAGGCTAGAACATTCCTCTTCCTGAACTCTCTCTTACCGGTGATAGTTGGCCTAATAGCAGCTCCTCTAGTCAGAGAAATTGAAGTCACAAGTCTTAAGCACAAAGGTGTTGGGTTTGCTGTGATGTTTGTCATAACAATTTCCACTGGAATATATGCTGTGTTGAGCAGCTTGCAATTTGTCACAAGCAAAGCATCCTCACTAGGTATCCTGATTGGTATTCTAGTGTCACTTCTCTTGCCTCTCCTAGTCCCACTTTCAGTGAAGATCAAGGAactagagaaaaatagagagaaattaaGAGTCTACCAttttactatggaggaaaataCTAATGAAGAGAGGGTGGAGAATGAGGTGAAAGAGGGTGAAGATAGCAGAGAAGTTCAAGAAGAGGTTGGTATTATGGAAGAAGTTGGAGTGAAGTTGATGCTGAGAAGAATAAATTTCTGGTTATATTTCTTTGTCTACTTTTTTGGTGCAACTATTGGTTTAGTGTATCTTAATAACTTGGGACAAATAGCTGAATCCCGGGGTTGCTCTGGTACTTCATCTTTGGTGTCTTTGTCTTCATCATTTGGGTTCTTTGGCCGTCTCATGCCATCTCTTATGTACTACTTCTACAGGGGACAGGGTAGAATTTCAAGACCTGCTTCTATGTTGATAGTGATGGTTCCCACATCCGGTGCATTTTTCTTACTTCTAAATAAAACTGACCTTGCCCTCTACATCAGCACTGCAGTGATTGGAGTGTGTACTGGAGCAATCACTTCCATTGCTGTTTCCACAACTACTGAGCTATTTGGTACTAAGCATTTCTCAGTGAACCATAATGTGGTGGTGGCCAATATTCCTATGGGGTCCTTTTTGTTTGGCTACTCAGCTGCACTTGTTTACCGTAAGGAAGGGCATGAACATGGGAAATGCATGGGCATGGAATGCTACAGAAACACTTTTATCATGTGGGGTTCCTTTTGTTTCCTTGGAACTCTTTTGGCTTTGATTCTACATGCTAGGACTCGCAAGTTTTACTCACAAAAACAATAG 1539 0.4113 MTSTTLQWLSLVGIIWLQAIVGTNTNFPAYSSQLKELLSISQVQLNNLAFASDAGKLFGWFSGLASLYLPLWLVLLIGSTLGLIGYGVQYLFITNHISSLSYWHVFLLTFLAGNSICWINTVCYVVIIRNFPSDRQVAVGITTSYQGLSAKIYANIVDAVSPHKKARTFLFLNSLLPVIVGLIAAPLVREIEVTSLKHKGVGFAVMFVITISTGIYAVLSSLQFVTSKASSLGILIGILVSLLLPLLVPLSVKIKELEKNREKLRVYHFTMEENTNEERVENEVKEGEDSREVQEEVGIMEEVGVKLMLRRINFWLYFFVYFFGATIGLVYLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLMPSLMYYFYRGQGRISRPASMLIVMVPTSGAFFLLLNKTDLALYISTAVIGVCTGAITSIAVSTTTELFGTKHFSVNHNVVVANIPMGSFLFGYSAALVYRKEGHEHGKCMGMECYRNTFIMWGSFCFLGTLLALILHARTRKFYSQKQ 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1277 512 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 511 - -
Ssu9g1277 512 SUPERFAMILY MFS general substrate transporter 8 506 IPR036259 -
Ssu9g1277 512 CDD MFS_Mch1p_like 6 494 - -
Ssu9g1277 512 Gene3D MFS general substrate transporter like domains 7 504 IPR036259 -
Ssu9g1277 512 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 511 - -
Ssu9g1277 512 Pfam Nodulin-like 7 249 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1277 Ssu-Chr9 46436316 46438443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1277 1 511 Nodulin-like Gene Family AT2G30300 49.234 9.69e-156 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1277 - - gmx:100800763 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1277 9 46436316 46438443 Ssu9g1277 9 46436316 46438443 ECH
Ssu9g1277 9 46436316 46438443 Ssu6g2746 6 63846921 63848652 PCT