Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1274 ATGGAAAGTGCAAAACACTTGGTGTTTGATCTTCCTTCTCAAGATGAAAGTGGCTACCAATACCCCTTGGTGTTCAAGGTGATAAAGTTTCCTTGTAGGGGTTTCACTATTGGAATGGGGCTTTCACATGCTGTTTGTGATGGCATTGGGGCATCTCAATTCTTCAGAGCCATCATTGAACTTGCAAGGGGAAAAAGTGAGCCCTCCGTGAAGCCTGTGTGGGAGAGAGAAAGGCTAGTGGGATCAATCACTAAGCAACCACTGCAAATTGATTATGTGGATGAGGCCTCAGGTGCAGTTTCACCGTTTCTGCCAACCAAAGTTCTCATGCATGAGTGCATTAAGGTGGACAGGGAGAGCATTAGAAGACTAAAGATGAGTTTGATGAAGGAATCAGGTGGCAATGAGAGCATCACAAGTTTTGAATCACTTGCAGCATATGTGTGGAGGTCAAGAGCTAGAGCCTTAAAAATGAGCTATGATAAGAGAATTATGCTACATATCACAGTTGGGGTGAGGAGGCACTTGCTGGATCCTCCTTTGCCAGAAGGGTATTATGGGAATGCTATTGTGGATGGAGTAGTTGTTTTAACAGTGAGGGACCTCAATGAAAGGCCACTCTCTGAGGTTGTGAAGCTCATCAGAGAAAGCAAGAAGGTTGCTTTTGACAGTGATTATATCAGGAACTTCATCAACACTATAGAGACGGAACAAGCGGATCTTAACATTGAAGGTACTGGTGCATTGACGACTATGACTGATTGGAAGCACTTGGGTTTCATGGAAAACGTAGATTTTGGATTTATGGAATTAGTGAACACTGTACCTGCCCCACGTGACATGTTTGGGTCCGTTGATTTATgcattttctcatctcttaGCAAAATTGGATTCTTCAATGAAAGGAGGGGTTAG 915 0.4284 MESAKHLVFDLPSQDESGYQYPLVFKVIKFPCRGFTIGMGLSHAVCDGIGASQFFRAIIELARGKSEPSVKPVWERERLVGSITKQPLQIDYVDEASGAVSPFLPTKVLMHECIKVDRESIRRLKMSLMKESGGNESITSFESLAAYVWRSRARALKMSYDKRIMLHITVGVRRHLLDPPLPEGYYGNAIVDGVVVLTVRDLNERPLSEVVKLIRESKKVAFDSDYIRNFINTIETEQADLNIEGTGALTTMTDWKHLGFMENVDFGFMELVNTVPAPRDMFGSVDLCIFSSLSKIGFFNERRG 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1274 304 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 294 - -
Ssu9g1274 304 Gene3D - 104 299 IPR023213 -
Ssu9g1274 304 PANTHER ACYL TRANSFERASE 4 2 294 - -
Ssu9g1274 304 Pfam Transferase family 7 285 - -
Ssu9g1274 304 Gene3D - 1 91 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1274 Ssu-Chr9 46412351 46413265 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1274 11 268 Monolignol Biosynthesis Gene Families AT5G48930 29.304 3.72e-21 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1274 K20240 - gmx:100783730 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1274 9 46412351 46413265 Ssu9g1274 9 46412351 46413265 ECH