Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1272 ATGGCAAACCTAAACACACCCCTTGTCCTTGACATGAAGGATGTTGTGATAGTTAAACCCTCCAAGCCCACCCCATCTGATCTTCTTTCCCTGTCCACCATTGACAGTGATCCTGTTCTCAACATTCTGTGTCACACCATTTATGTATACCAAGCAAATCTTGATTCCCCAAATGGCCAACTAGACCCTGCTCATGTGATAAAAGAGGCCCTCTCAAAGGTTTTGGTTTACTATTATCCTCTTGCAGGGAAGATAGTAACATTAGATGATGGAAAACTTGGAATCAACTGCAATGCTGATGGAGTTCCATTCTTGGAGGCAAGTGCTAACTGTGAACTCTCTTCTCTTCACTATCTTGAAGGGATTGATGTTCCAACTGCACAGAAATTGGTGTTTGATAACCCTTCTCAAGATAAAAATAGTCACCACCCCTTGGCTTTCAAGGTGACCAAGTTTCTCTGTGGGGGTTTCACCATTGGAATGGGGTTGTCACACAGTGTTTGTGATGGGTTTGGTGCATCTCAATTCTTCAGAGCTTTGGCTGAACTTGCATGTGAAAAAAGGGAGCCCTCAGTGAAACCTGTGTGGGAGAGGGAGAGACTAATGGGGACACTTCTTAAGGAACCACTTCAATTTCCCATAGATGAGACTTCAAGGGCAGTTTCACcattttggccaactaaggagATTTCACATGAATGCTTTAACTTAAACGGTAAGAGCATACAAAGACTCAAAATGGAACTGATGAAGGAAAGTGATGATGTGAAGGAAAGCTTCACAACTGTTGAAACACTTGGTGCCTATGTTTGGAGGTCAAGGGCTAGAGCTTTGGAACTGAACTCTGATGGGAAAACTTTGTTGGGTTTAACAGTAGGGGTGAGACGCCTATTGGATCCATCTTTGCCTGAAGGGTATTATGGTAATGCTATTGTGGGTTCATTTGTGGTGTTAACGGTGAAAGAACTTGATGAAAGACCACTCTCAGAGGTTGTGAAGCTCATCAAAGAGAGCAAAAAGCTTCCTTCTAATAATGAGTACATCAGAAACTCAATAAACATGTTGGAGACAATGAGACAAAGGAACATTAGGATTGGAGGAACTGGTGCATCTGTGGTGTTAACAGATTGGAGGCAGCTGAGTTTGTTGGAAGAAGTGGATTTTGGATGGAAGGCTTCAGTGAATATAATGCCAGTTCCATGGAACATGTTTGGCTATGTGGACTTGTGCCTTTTCTTGCCTCCTAGTAACTTGGATCCTTCAATGAAAGGAGGAGTTAGGGTCTTTGTTTCCCTCCCCAAAGCTTCCATGCCCAAGTTTAGGGAAGAGATGGAGGCCCTCAAACTTATAAGAGTTGATGAGGGTAGCATCTAG 1374 0.425 MANLNTPLVLDMKDVVIVKPSKPTPSDLLSLSTIDSDPVLNILCHTIYVYQANLDSPNGQLDPAHVIKEALSKVLVYYYPLAGKIVTLDDGKLGINCNADGVPFLEASANCELSSLHYLEGIDVPTAQKLVFDNPSQDKNSHHPLAFKVTKFLCGGFTIGMGLSHSVCDGFGASQFFRALAELACEKREPSVKPVWERERLMGTLLKEPLQFPIDETSRAVSPFWPTKEISHECFNLNGKSIQRLKMELMKESDDVKESFTTVETLGAYVWRSRARALELNSDGKTLLGLTVGVRRLLDPSLPEGYYGNAIVGSFVVLTVKELDERPLSEVVKLIKESKKLPSNNEYIRNSINMLETMRQRNIRIGGTGASVVLTDWRQLSLLEEVDFGWKASVNIMPVPWNMFGYVDLCLFLPPSNLDPSMKGGVRVFVSLPKASMPKFREEMEALKLIRVDEGSI 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1272 457 Gene3D - 9 209 IPR023213 -
Ssu9g1272 457 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 448 - -
Ssu9g1272 457 PANTHER ACYL TRANSFERASE 4 5 448 - -
Ssu9g1272 457 Pfam Transferase family 16 446 - -
Ssu9g1272 457 Gene3D - 226 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1272 Ssu-Chr9 46380020 46381393 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1272 10 442 Monolignol Biosynthesis Gene Families AT5G48930 27.517 2.00e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1272 K20240 - gmx:100801843 799.66