Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1264 ATGGAGGTAGGCCAGGACAACCTCATTCACAATGTCATGCATGTCGAAACCAAGGTAGACACATCATTTGGAAGGCCTTTCATATGCCACAATACAATTAATCAAATCAACTCTAAAGGAATCTGGTTTGGAGATGATCCACTTGCAtattctctccctctcttcttGTTTCAACTTTTCCTCATGTTCATCTTCACCCGTTTCATCTACCTTATTCTCAAGCCCTTTTGTCAACCGTCTTTTGTTTCTCAAATTCTTGGTGGTGTGACTTTAGGCCCTTCTATTCTTGGGCACAATATAACATTTGTTGACAAGGTTTTCCCATCAAAAGGAAGAAATCTACTTGATACCATggccttttttggttttatgaTATTCGTCTTCCTAATTGGGGTAAAGATAGATCCAACCATCATTTTTAGATCAAGTAAAAGGACTTTTGCCATAGGAATTTTAGGCTACTTTATTCCTTACACTTTTGGCAGAACAGTTGTCCTTATCCTCAATCGCTTTGCATCATTGGATAATGATCTTTCTAAAGTGCTCCCTATTGTGCTAGAAATTCAATGTATTGCATCCTTTCCAGTAATTACTCGCTTTCTTTCTGAACTTCAAATCCTCAATTCAGAGATTGGGCGGTTGGCTACTTCTTCTTCATTAGTGTGTGATGCTTGCTTCACTTTAATTATGACAATGAAGTTTGTTTCAAACTTATCCTTCACAAAGTCAATAGGAGTATTTATTGGATCTTTATTGTCCATCATGCTACTTATTATGTTCATCATCTTTGTAGTTCACTCAGCTGCATTATGGGCAATTCAACAATCATCAAAACGGAAACATGTTcaagaaatttatatttgtgGGGTTCTTCTAACACTAATGTTTTGTGGATTCATGGGTGAAGTCATTGGCCTGAATGCAATTATTGTATCTTTCATGGTGGGGCTGGCTATACCAGATGGTCCACCATTAGGAGCAGCATTGGTAGATAAGCTCGATTGTTTTGTTTCAGTAGTGTTCATACCTATACTTTTTGTTATAGTTGGATTAAGGACAGATGTGGTCTTTGTTGCCTCTCCTTTTCCTCAAGATGCCATTTCGAGATGCCTTTTTCTTGGTCTTATAATGAATTGCAAAGGCACTGTTGAATTGGCTTTATTGATGgacttgaaattaaataatGTCTTGAATGATGAATGCtttacaattttggttcttACTTTAGTGTTTATAACTGGGATTGTTTCACCTGTTGTGAAAGCTTTGTATGATCCTTCTAAGAGGTTTCTTGCTTATAGAAGAAGGACAATTATGCATCACAAAAATGATGAAGAACTGCATATCCTAGCTTGCATTCATCAACAAGATAATGTTCTGGCTATTTTGAACCTTCTTACTGCTTCCAATCCTACTAAAGCAAGCCCTTTTGATTTAGTTGTGCTCCATCTTATTAAGCTTGTGGGGCAAGCTTCCTCTATACTTATCGCACATATGCCGCGTAAAAATCCTAGTCAACATCTTACTCAAACTGAAAAGATTTTCAACTCATTCAACAAGTTTGAAGATGCATATAGGGGCAAGGTCACACTGCATTGCTATAAGGGCATCTCTCCCGATGATACAATGCACAATGATCTTAATAAGCATGTTTTAGAGAAAGCTCCTTGTTCAGTTGGGGTCCTCATTGATCGTGGCAAtcagaagatgttttggtgtgGCTATACAAAGGAATCAATATATAAAGTGGCTATGTTCTTCTTTGGGGGTGCAGATGATCGAGAAGCACTTTCATATGCAAGACGCATGTTAGACCAATCTAATGTCCACATtacactttttcatttttcatctttagCAGAGATTCTTGGTGGAACAGAAAGGAGCAAAATGCTTGACACCCAAATCTTGAGTGAGTTTAGGCTTAAGGCCTTTCGAAATGAGAGAGTTTCTTACAAAGATGAGTTCGTGATGAATGCAAGGGATGTTCTTTCAGTTATTGAATACATGGGGAGTTGTTATGACCTTGTTATGGTTGGAAGGAGGCATGGAGAttcaaaattaatgtctaaACTCAGAAAATGGAAGCATGGAGAGTTAGGAATTGTAGGAGAGATTCTTGCCTCTTTAAATATTGGAGCCAAAACATCAATTTTAGTGGTGCAACAACAAACCAAATTTTGGGGATCACGTGATCTAGAGGACTCCACACATTTGAGAAGagtaaatatataa 2235 0.3553 MEVGQDNLIHNVMHVETKVDTSFGRPFICHNTINQINSKGIWFGDDPLAYSLPLFLFQLFLMFIFTRFIYLILKPFCQPSFVSQILGGVTLGPSILGHNITFVDKVFPSKGRNLLDTMAFFGFMIFVFLIGVKIDPTIIFRSSKRTFAIGILGYFIPYTFGRTVVLILNRFASLDNDLSKVLPIVLEIQCIASFPVITRFLSELQILNSEIGRLATSSSLVCDACFTLIMTMKFVSNLSFTKSIGVFIGSLLSIMLLIMFIIFVVHSAALWAIQQSSKRKHVQEIYICGVLLTLMFCGFMGEVIGLNAIIVSFMVGLAIPDGPPLGAALVDKLDCFVSVVFIPILFVIVGLRTDVVFVASPFPQDAISRCLFLGLIMNCKGTVELALLMDLKLNNVLNDECFTILVLTLVFITGIVSPVVKALYDPSKRFLAYRRRTIMHHKNDEELHILACIHQQDNVLAILNLLTASNPTKASPFDLVVLHLIKLVGQASSILIAHMPRKNPSQHLTQTEKIFNSFNKFEDAYRGKVTLHCYKGISPDDTMHNDLNKHVLEKAPCSVGVLIDRGNQKMFWCGYTKESIYKVAMFFFGGADDREALSYARRMLDQSNVHITLFHFSSLAEILGGTERSKMLDTQILSEFRLKAFRNERVSYKDEFVMNARDVLSVIEYMGSCYDLVMVGRRHGDSKLMSKLRKWKHGELGIVGEILASLNIGAKTSILVVQQQTKFWGSRDLEDSTHLRRVNI 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1264 744 PANTHER OS08G0117800 PROTEIN 20 361 - -
Ssu9g1264 744 PANTHER OS08G0117800 PROTEIN 370 546 - -
Ssu9g1264 744 Pfam Sodium/hydrogen exchanger family 62 358 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu9g1264 744 Gene3D - 54 430 IPR038770 -
Ssu9g1264 744 PANTHER CATION/H + ANTIPORTER 546 728 - -
Ssu9g1264 744 PANTHER OS08G0117800 PROTEIN 546 728 - -
Ssu9g1264 744 PANTHER CATION/H + ANTIPORTER 20 361 - -
Ssu9g1264 744 PANTHER CATION/H + ANTIPORTER 370 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1264 Ssu-Chr9 46293109 46296771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1264 17 735 Antiporter Super Family AT2G13620 33.458 1.34e-137 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1264 - - gmx:102665255 1126.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1264 9 46293109 46296771 Ssu9g1264 9 46293109 46296771 ECH
Ssu9g1264 9 46293109 46296771 Ssu6g2726 6 63202287 63205310 PCT