Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1263 ATGGAATCCGATATGAAAGATCAATTGAGTTCTTATGGAATGATTGGCAATGAGAAATTAGTATGTCAATATGTAATAAAACACATAACCAAGGGTGTTTGGTTTGGAGAGAATCCCCTGCATCACGCCACATCTATCTTATTTATTCAGATCATTCTTATGTATGTTGTTGGTAGAATCACTTATCTATTGTTGAGGCCTTGTCATCAAACCTTTCTCATTGCACAGATTGTGGCTGGAATCATATTAGGTCCTTTATTTCTAGGTCAACACAATGCAAGTTATAAGATGATATTTCCAATAGCAAGCCAAACGACACTCACAACATTTGCAGAATTTGGCATGATAATCCATTTCTTTAAGATTGGGGTGCAAATCAATCCTAAGCAAATCTTGAAGATTGAAAAGCAAGCAATAGTAATTGGTCTCATAGGCCACATGTCTGCTATAGCACTTAGTGGTgtagttttaaatattgttaGAGTGATCTGCCCTGAGGTGACTAAAGACACTGGTGTTCACGTTTTAGTGATATCATCCTCTGTGACTGCATTTCCTGTTATAAGTGGCTTCCTAACTGAGATGAACATTCTTAATTCAGAGGTTGGACGCATGGCTATATCCACTTCCATGGTCAGTGATTCATGCATGTGGATATTgtattttgtgataatcaatAGTACTAAAGCAGTAGAACTACACACATATAAACCTGTTACAGAAATAGCTGTGACAATTTGttatttctctatcttattcttttttctaagGCCATTGGTTTTATGGATCTCTAACCGCAATCCACGAGGAAAACCTATGACAGAAAGCCATTTCTTGTCAATCATTTGTATACTTCTATTTGTTGGATTCTCTGCAAGTGTAGCAGGGCAACCTCCTTTCCTTGTTGCTTTTTGTTTTGGCTTGATCTTGCCAGAAGGTCCCCCTTTAGGTTCTGTTTTAGCAGAAAGGCTTGACACTGTTGGTTCTACTTTGATTGTTCCATCTTACTATACTATTACTGGCCTTAGGACCAATGTTCCTTCATTAGTAGAATCCAAGTCAGCAACCATAGAGGTTATCTTAATTGCAATGTACGTAGGAAAGTTCGTGGGTACCATTTTACCTTCACTTCACTTTCAGATTGAATTTTGGGATTCTTTTGCACTAGCTCTAATCATGTGTTGCAAAGGCCTCGTGGATCTCTGCATGCTcaatttgttattgaattcTGAGGCAATAGGAGAACTACCTTTTACTCTTGCTATATTTACTATGGTGGCCGTAACTGGGTTTGCAACTCTAGTTGTTTATTACATATATGATCCTTCAAGGAGGTATAAAGCCTATATTAGAAAGTCAATTAGGGATTCTCAGCAGAACCCTGATCTCAAAATACTTGTTTGCATCCACAATGAAGAAAATGTATATCCAATCATCAACCTTCTTCAAGCCTCCAACCCCACAAAGGCTACGCCCCTCTCAGTCTTCGTCCTACATCTCATGGAGCTCTCAGGCAGGGCAATACCCACTCTTACAAAAAATGAGGGCACTGACAAGTCATCTCAACATATAAACAACGTCTTTGATCAATTTCAGATGCACAATAAAGGATGTGTCATGTTGCAGTGCTTCACTGCAATTACACCATACGCAAGCATGCATGATGACATATGCTACATGGCAATGGACTCCAAATCCAACATTGTGATTATGCCATTTCATAAGCAATGGTCCATCGATGGAAATGTTGAGTTCTCCAATACTTCAATTAGGTTACTAAACCAGAAAGTTCTAAAGAAAGCTCCTTGTTCTGTTGGAATCTTCATAGATCGAAGCCAGATGAGTGGTAAATTAATAGTCATATATGAGAAGTCATTTTGTGAAATTGCCATGATCTTCTTAGGTGGAGGTGATGACCAAGAGGCATTGGCTTATAGTTTACGCATAGCTCAGCATCCAAATGTGAGACTAACAGTGTTTTGGGTGAGGGTTAAAGTGCAAGGCAACCAAAGGAAAATGAAGAACCCTTACATTGACTTGATGGAGCATATACGTTATAGTAGTAACCATGAAGGTAAAGTGGCCTTCAAGGAAGAGATTGTGGAAGATGGAGCAGGAACAACACAAGTTATTCGAATGATAGAGGGACATTTTAGTTTGGTCATAGTGGGTAAACATCATTTGGCAGACTCTCCATGTACACTGGGATTGACTGAATGGTGTGAACTTCCTGAGCTTGGTCCGCTTGGGAACCTCCTAGCCACATCAGATTTTACATTTTCAGTTTTGGTGGTGCAACAACAACCCCCCTTTAACTATAAATTCGGGCATATTAGGTGa 2340 0.3825 MESDMKDQLSSYGMIGNEKLVCQYVIKHITKGVWFGENPLHHATSILFIQIILMYVVGRITYLLLRPCHQTFLIAQIVAGIILGPLFLGQHNASYKMIFPIASQTTLTTFAEFGMIIHFFKIGVQINPKQILKIEKQAIVIGLIGHMSAIALSGVVLNIVRVICPEVTKDTGVHVLVISSSVTAFPVISGFLTEMNILNSEVGRMAISTSMVSDSCMWILYFVIINSTKAVELHTYKPVTEIAVTICYFSILFFFLRPLVLWISNRNPRGKPMTESHFLSIICILLFVGFSASVAGQPPFLVAFCFGLILPEGPPLGSVLAERLDTVGSTLIVPSYYTITGLRTNVPSLVESKSATIEVILIAMYVGKFVGTILPSLHFQIEFWDSFALALIMCCKGLVDLCMLNLLLNSEAIGELPFTLAIFTMVAVTGFATLVVYYIYDPSRRYKAYIRKSIRDSQQNPDLKILVCIHNEENVYPIINLLQASNPTKATPLSVFVLHLMELSGRAIPTLTKNEGTDKSSQHINNVFDQFQMHNKGCVMLQCFTAITPYASMHDDICYMAMDSKSNIVIMPFHKQWSIDGNVEFSNTSIRLLNQKVLKKAPCSVGIFIDRSQMSGKLIVIYEKSFCEIAMIFLGGGDDQEALAYSLRIAQHPNVRLTVFWVRVKVQGNQRKMKNPYIDLMEHIRYSSNHEGKVAFKEEIVEDGAGTTQVIRMIEGHFSLVIVGKHHLADSPCTLGLTEWCELPELGPLGNLLATSDFTFSVLVVQQQPPFNYKFGHIR 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1263 779 PANTHER CATION/H(+) ANTIPORTER 14 33 769 - -
Ssu9g1263 779 PANTHER CATION/H + ANTIPORTER 33 769 - -
Ssu9g1263 779 CDD USP_Like 635 728 - -
Ssu9g1263 779 Pfam Sodium/hydrogen exchanger family 51 434 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu9g1263 779 Gene3D - 44 448 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1263 Ssu-Chr9 46272744 46276088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1263 18 768 Antiporter Super Family AT1G06970 37.532 1.78e-173 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1263 - - gmx:100804488 1350.5