Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1258 ATGTCACATATGAAAACTTCATGCATGACAAGGGTATTCACACCACATCGTTTGCTACAAGCATCCAATGGATGGCAGCAGCATTTCAATCCTCCTCGTCTCCTACAACAAAACATGGTTGACCTTCCTATGAATAACTCTACAACTTCCTTCCCCATTTTGTGTCATTCAGTACAAGCTTCTCACTCCTCTGGAATTTTTTTGGGTGGCAACCCTTTAGCTCATTCCTTCTCACTAATATTGTTCAACCTCATTTTAATCACCGCTATCACTCGCATTCTTCGTTTTCTTCTCAAGCCCCTCAGACAACCTCTAATCATCTCTCAAATAATAGGTGGTGTCATTGTTGGACCTTCCTTTTTGGGGCGCAATAGATGGTTTCAGCGTCACATGACAACCGAATCAAGCCAATTCCTGGTGAACAATCTTGGAGTAATGGGATTCATGTTCTTTCTTTTCGTTTATGGTGTGAAGATGGATCCgagccttttaaaaaaatcaggGAAATTGCATGTATCTACTGCGTTGATTGGCATATCAATTCCCGCAGTGACAGTGTTTGTTGTGTCACTATGCATGAGAAAAAACATGGACAAAGAATTAGCCACGATTCCTTCATTAGGAGCAATAGCAGCGTCCTTGGGGGTCACGGCATTCCCTGTTCTCTACCACATCCTCAAAGAGCTTAACCTTCTAAACTCGGATGTGGGGCGAATTGCATTGTCCACAGCATTAATTGGTGATGCATTTGGTGTATCTTGTATACTAACATTTGAGGCAGCAAGTCaaggagaaacaaaaataataaataccttgTGGTATGTGATTTCTGTTGTGGTTGTAGTAGCATTCCTTCTGTTTTGTTTTAGGCCCGCAATGATGTGGATCAATAACAATACCCCAGAAGGGCAGCCAGTGCATCAGTCCTTTGTGGTTGCCATTCTTCTAGGGGCTTTTGTGATGGGCTTCATAACTGACATGTCTGGCATAGCAATTGCTAATGGGCCGTGGTTATTGGGCTTGGCAATTCCAGATGGACCTCGTGTAGGTGCAACAATAGTGGAGAAGAGCAAAACAATTTTGACCGAGCTCCTCCTTCCATTCTCATTCATTATGGTGGGATCATTCACTGATTTTTATGCCATGAGTGCTTCTGGTTGGTCCAGCTTGTCACCATTGTTTGTCATGGTTTTGACTGGCTACTTGATCAAATTCTTTATCACTTGGATTACTCTATATTTTTGGCGAATGCCATTCAGAGATGGACTAACCCTCAGCCTCATTATGAGCTTAAGAGGccatattgaaattatattgtTTGTGCATTTGATGGACAAAAACATCTTAAAGGTGCCAGGCTTCTCACTATTGGTTCTTATGACAATAATATTGACAGCAACTTTCACTCCTTTGATCTCCATATTATATGATCCAACAAAGCCATACATGGTGAACCAAAGGAGGACCATTCAACACAACCCTCCAGATGAAGAACTTAGAATAGTGTTATGTATTCTTAACACTGAAACCATAAACAGTCTCATCCATCTACTTGATATCTCCAATCCAACCTCAAGCAGCCCCTTTTCAATTTCTGTTGTTAGACTAACCGAGCTTGTAGGTCGTGCTATCCCTTTGTTCTTGGACCATGAAAAGCAACAAGTTCCTCCCATTTATCAGTGGACAAACACCATAAACATCCTTAAACATCATCAACAACTGAAAGGGATGTTTATGAATCTCCATTTTTTCACAGCTGTGGCTCCAACGCAGTCAATGTTCCGAGACATATGTGAGCTTGCCCTTGAGCAAGAAGCTTCTTTGATCATCTTACCTTTCAGCAGTGTTGATGTTCATAACCATGTAGTGAAGACGGTGAATTCACAAGTGTTGAATCATGCACCTTGCTCAGTTGCAATATTTGTTGATAAGGGTCTTCTTGAAGTCAACACCATGGGCAGTTCCTTTTGTCGAACTAGACATCGATTTGCTGTGTTGTTTCTTGGGGGTGGAGATGCTAGAGAGGCTCTTGTTTATGCAGATAGGATGGTTGCTAACCAAGATGTGTCCCTCACAGTTATAAGGTTTCTCTCTCACAACTATATAGGCTAcaatgaaatagagaagaagCTTGATGATGGAATTGTGACTTGGTTTTGGGTTAAGAATGAGATGAATCAAAGAGTGGTGTACAGAGAGGTGGTGGTTAGAAATGGAGAAGAAACAATTGAAGCAATTCAGGCTATGAATGATGGCGCTTTTGATCTTTTGATAGTGGGGAGGAAACAAGGGATAAACCCTGTTCTTCTCACTGGGTTATCAGAATGGAGTGAAAGTGAAGAGTTGGGACTCATAGGAGACTATGTTTCCTCTGAAGATTTTTTTGGCTCAGCTTCTGTTTTAGTTGTACAACAACAAATCCTAAGAGGCTAA 2433 0.4028 MSHMKTSCMTRVFTPHRLLQASNGWQQHFNPPRLLQQNMVDLPMNNSTTSFPILCHSVQASHSSGIFLGGNPLAHSFSLILFNLILITAITRILRFLLKPLRQPLIISQIIGGVIVGPSFLGRNRWFQRHMTTESSQFLVNNLGVMGFMFFLFVYGVKMDPSLLKKSGKLHVSTALIGISIPAVTVFVVSLCMRKNMDKELATIPSLGAIAASLGVTAFPVLYHILKELNLLNSDVGRIALSTALIGDAFGVSCILTFEAASQGETKIINTLWYVISVVVVVAFLLFCFRPAMMWINNNTPEGQPVHQSFVVAILLGAFVMGFITDMSGIAIANGPWLLGLAIPDGPRVGATIVEKSKTILTELLLPFSFIMVGSFTDFYAMSASGWSSLSPLFVMVLTGYLIKFFITWITLYFWRMPFRDGLTLSLIMSLRGHIEIILFVHLMDKNILKVPGFSLLVLMTIILTATFTPLISILYDPTKPYMVNQRRTIQHNPPDEELRIVLCILNTETINSLIHLLDISNPTSSSPFSISVVRLTELVGRAIPLFLDHEKQQVPPIYQWTNTINILKHHQQLKGMFMNLHFFTAVAPTQSMFRDICELALEQEASLIILPFSSVDVHNHVVKTVNSQVLNHAPCSVAIFVDKGLLEVNTMGSSFCRTRHRFAVLFLGGGDAREALVYADRMVANQDVSLTVIRFLSHNYIGYNEIEKKLDDGIVTWFWVKNEMNQRVVYREVVVRNGEETIEAIQAMNDGAFDLLIVGRKQGINPVLLTGLSEWSESEELGLIGDYVSSEDFFGSASVLVVQQQILRG 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1258 810 Pfam Sodium/hydrogen exchanger family 84 471 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ssu9g1258 810 PANTHER CATION/H + ANTIPORTER 52 809 - -
Ssu9g1258 810 Gene3D - 579 777 - -
Ssu9g1258 810 Gene3D - 78 481 IPR038770 -
Ssu9g1258 810 PANTHER CATION/H(+) ANTIPORTER 24-RELATED 52 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1258 Ssu-Chr9 46178506 46183105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1258 48 807 Antiporter Super Family AT5G58460 41.814 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1258 - - gmx:100783296 1231.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1258 9 46178506 46183105 Ssu9g1258 9 46178506 46183105 ECH